| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2850 |
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| Symbol | mfd |
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| ID | 3720536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1453666 |
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| End bp | 1457163 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070982 |
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| Product | transcription-repair coupling factor (helicase) |
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| Protein accession | YP_352861 |
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| Protein GI | 77463357 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.74664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACG GAACGCGGAT CTTCCTCGGC GGTGCGCCCG AGGGCTACGA TGCCCGGCTG
GTCGCGAAAG AGCTCGACCG CGGTGCCCCT GTCATTCACG TCGCGCGCGA CGACAAGCGG
CTCGAGGCCA TGCGCACGGC GCTGGCCGTC ATGGCGCCGC GCGCCGTGGT GCTGGAGCTT
CCGGCCTGGG ACTGCCTGCC CTACGACCGG GTCTCGCCCA ACCCCGAGAT CTCGGCGCGG
CGGATGGCGA CGCTCGCCGC CCTGGCGCAC GGGATGCCGG GGGCCTTCGT CCTGCTGACC
ACGCTCAATG CCGCGACCCA GCGCATTCCC GCGCGCGAGG TGCTGCGGGC GGCCTCCTTC
TCGGCCCGCG TGGGCGACCG GGTGGATGAG GGACGCCTTA GGTCCTATCT CGCCCGCATG
GGATTCTCGC TCACCGACAC GGTGACGGAG CCCGGCGACT ATGCGATCCG CGGCGGCATC
GTCGACATCT ATCCGCCGGG TGTGGCGGGG CCGGTGCGGC TCGATTTCTT CGGCGACGTG
CTGGACGGAG CGCGCCGCTT CGACCCCGAG ACCCAGCGCA CGGTCGAGAA GCTCGACCTC
GTGGAGCTGG CCCCGGTGTC GGAGGTGATG CTGGACGAGG GTGCCTTTAC CCGCTTCCGC
CAGAACTATC GGATCGAGTT CGGCGCGGCG GGGACGGACG ACCCGCTCTA CGAGGCCGTG
TCGGCAGGCC GCAAGCATCA GGGGATGGAG CACTGGCTGC CCTTCTTCCA CGCGCGGCTC
GAGACGCTCT TCGACTATCT GCCCGAGGCG AGCGTGATGC TCGACGATCA GGTGACGCCG
GCGCGGATCT CGCGCTGGGA GGGGATCGCC GACCAGTATG ACGCGCGGCG CGAGGCGATG
ACGGCGAAGG GCCGGCTCGA CACGGTCTAC AAGCCCGCCG CGCCGGATCT CCTCTATCTC
GACGAAGCCG CATGGGAGGC GGCCGTGGCC GGGCACCGGG TGATCCAGCT TTCGCCGCTG
GCCCAGAGCC CCGGTCCGGG CGTCCTCGAT GCGGGCGGGC GGATGGGGCG CAGCTTCGCG
CCCGAGCGTC AGGCCGAAAA CATCAGCCTG TTCGGGGCGT TGGTCGATCA TGTTCGCAGC
TTGCGCGAGG ATCGGCAGGT CGTGATCGCC AGCTGGTCCG AGGGCGCGCG CGAACGGCTG
AAGGGGCTTC TCGAGGAAGC CGGCCTGCAG GGCACGAAGC TCGCGCAGGA CATCCGCGAC
GTGCCCGAGG CACGCGGCGG CACGCATCTG ATGGTCTGGG CGCTGGAGCA GGGCTTCACC
GCGCCGGGGC TCGCCGTGAT CTCGGAACAG GATGTGCTGG GCGACCGGCT GATCTCGAAG
CCGAAGAAGC GCCGGAAGGC CGAGAACTTC CTGCGCGAGC ACGACACGCT GACGCCCGGC
GATCTCGTCG TCCATGTCGA GCATGGCGTG GGCCGCTACA TGGGCCTCGA GACGCTGCGG
GTGCCGCAGC CGCCCTCGAA CAAGCCGGGG CCGCCGCACG ATTACCTGCA TCTCGTCTAT
GCCGAGGACG CGAAGCTCTA CCTGCCGGTC GAGAATATCG AGCTTCTGAG CCGCTACGGG
CACGAAGAGG GGCTGCTCGA CAAGCTGGGC GGCGGGGCGT GGCAGGCCAA GAAGGCGCGC
CTCAAGGAGC GGATCCGCGA GATTGCCGAG CGGCTCATGC GGATCGCGGC CGAGCGGCAC
CTGCGCCATG CGCCGATCCT CGAGGCGCCG CATTCGCTGT GGGAGGCCTT TTCGGCCCGC
TTCCCCTATC AGGAGACGGA CGACCAGCTG TCGGCCATCG CGGATGTGGT GAAGGACCTC
GAATCCGGCA GCCCGATGGA CCGGCTCGTG GTGGGCGATG TGGGCTTCGG CAAGACCGAG
GTCGCGATGC GGGCGGCCTT CGTGGCGGCA TTGGCGGGCA TGCAGGTGGC CGTCATCTGC
CCGACCACGC TTCTCGCCCG TCAGCATTTC CGCAGCTTTG CCGAGCGCTT CCGCGGCTTT
CCGATGAAAG TGCATCAACT GTCGCGCTTC GTCTCGGCCA GGGAGGCGGC CGAGACGCGG
TCGGGCCTCG CCGACGGCAC GGTGGATATC TGCATCGGCA CCCATGCGCT TCTGGCCAAG
GGCGTGAAGC TGAAGAACCT CGGGCTCCTC ATCATCGACG AGGAGCAGCA TTTCGGCGTG
TCGCACAAGG AGCGGCTGAA GGAGATGCGC TCCGAGGTCC ATGTGCTGAC GCTGACCGCG
ACGCCCATCC CGCGGACGCT GCAACTGTCG CTGACCGGCG TGCGCGATCT GTCGATCATC
GCGACGCCGC CCGTGGACCG GCTCGCCATC CGCACCTACG TCTCGGAATT CGATACTGTG
ACGATCCGCG AGGCGCTCCT GCGCGAGCGG TATCGGGGCG GGCAGAGCTT CTTCGTCGTC
CCGCGGCTCT CGGATCTGCC CGACATGGAG GCCTTCCTGC GCGACCATGT GCCCGAGGTC
TCCTATGTGG TGGCGCACGG CCAGCTGGCG GCGGGCGAGC TCGACGAGCG GATGAATGCC
TTCTACGATG GCAAGTTCGA CGTGCTTCTG GCCACGACCA TCGTAGAGTC GGGCCTCGAC
ATCCCGACCG CCAACACGAT GATCGTCCAT CGCGCCGACA TGTTCGGCCT GAGCCAGCTC
TATCAGATCC GCGGCCGGGT GGGCCGGGCC AAGACGCGGG CCTATTGCTA TCTCACGACG
AAGCCGCGCG CGCCTCTCAC CCCGCAGGCG ATCAAGCGGC TGCGGCTGCT CGCCTCCCTC
GACAGTCTCG GCGCGGGCTT CAATCTCGCC TCGCACGACC TCGACCTGCG CGGCGCGGGC
AACCTCCTCG GCGAGGAACA GTCGGGTCAT ATCAAGGAGG TGGGCTACGA GCTTTACCAG
CAGATGCTGG AGGAGACGAT CCAGAAGATC CGCTCGGGCG AGCTGCAGGG CCTGAGCGAG
CCCGACGAGC AATGGGCGCC GCAGATCAAC CTCGGCGTCC CCGTGCTGAT CCCCGAGGAG
TTCGTGCCCG ATCTCGACGT GCGGCTCGGG CTTTACCGCA GGCTCTCGGG TCTCACGACC
AAGGTCGAGC TCGAAGGGTT CGCGGCCGAG CTGATCGACC GGTTCGGCCC GCTGCCGCGC
GAGGTCAACA CGCTTCTCCT CGTGGTGCGC ATCAAGGCCA TGTGCAAGCG CGCGGGCATC
TCGCGGCTCG AAACCGGCCC GCGCGGGGCG ACGGTGCAGT TCCACAACGA CAAGTTCGCC
AATCCGGCGG GCCTTGTGGA TTTCATCAAG GCGCAGGGCG AGACGGCGCG GGTGAAGGAC
AACAAGATCG TGCTTGCGCG CGACTGGAAG ACCGAAGGCG AACGGATCAA GGGCGCCTTC
GCCATCGCCC GCGATCTGGC CGAGAAGGTG GTGAAGCCTG AGAAGACCCC CGCCAAGGTC
GCTCGACCGG CGGGCTAG
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| Protein sequence | MQNGTRIFLG GAPEGYDARL VAKELDRGAP VIHVARDDKR LEAMRTALAV MAPRAVVLEL
PAWDCLPYDR VSPNPEISAR RMATLAALAH GMPGAFVLLT TLNAATQRIP AREVLRAASF
SARVGDRVDE GRLRSYLARM GFSLTDTVTE PGDYAIRGGI VDIYPPGVAG PVRLDFFGDV
LDGARRFDPE TQRTVEKLDL VELAPVSEVM LDEGAFTRFR QNYRIEFGAA GTDDPLYEAV
SAGRKHQGME HWLPFFHARL ETLFDYLPEA SVMLDDQVTP ARISRWEGIA DQYDARREAM
TAKGRLDTVY KPAAPDLLYL DEAAWEAAVA GHRVIQLSPL AQSPGPGVLD AGGRMGRSFA
PERQAENISL FGALVDHVRS LREDRQVVIA SWSEGARERL KGLLEEAGLQ GTKLAQDIRD
VPEARGGTHL MVWALEQGFT APGLAVISEQ DVLGDRLISK PKKRRKAENF LREHDTLTPG
DLVVHVEHGV GRYMGLETLR VPQPPSNKPG PPHDYLHLVY AEDAKLYLPV ENIELLSRYG
HEEGLLDKLG GGAWQAKKAR LKERIREIAE RLMRIAAERH LRHAPILEAP HSLWEAFSAR
FPYQETDDQL SAIADVVKDL ESGSPMDRLV VGDVGFGKTE VAMRAAFVAA LAGMQVAVIC
PTTLLARQHF RSFAERFRGF PMKVHQLSRF VSAREAAETR SGLADGTVDI CIGTHALLAK
GVKLKNLGLL IIDEEQHFGV SHKERLKEMR SEVHVLTLTA TPIPRTLQLS LTGVRDLSII
ATPPVDRLAI RTYVSEFDTV TIREALLRER YRGGQSFFVV PRLSDLPDME AFLRDHVPEV
SYVVAHGQLA AGELDERMNA FYDGKFDVLL ATTIVESGLD IPTANTMIVH RADMFGLSQL
YQIRGRVGRA KTRAYCYLTT KPRAPLTPQA IKRLRLLASL DSLGAGFNLA SHDLDLRGAG
NLLGEEQSGH IKEVGYELYQ QMLEETIQKI RSGELQGLSE PDEQWAPQIN LGVPVLIPEE
FVPDLDVRLG LYRRLSGLTT KVELEGFAAE LIDRFGPLPR EVNTLLLVVR IKAMCKRAGI
SRLETGPRGA TVQFHNDKFA NPAGLVDFIK AQGETARVKD NKIVLARDWK TEGERIKGAF
AIARDLAEKV VKPEKTPAKV ARPAG
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