| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2839 |
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| Symbol | ntrY |
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| ID | 3720547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1469768 |
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| End bp | 1472077 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640070993 |
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| Product | nitrogen regulation protein, NtrY, Signal transduction histidine kinase |
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| Protein accession | YP_352872 |
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| Protein GI | 77463368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAGGG CGGCCCAACC GCCCCCCGAG AGGCGGGACA GGCTATCCGT GCGGACTGCT
GTGCGCAGCA ACACCTGGAT CAAGCTCGCG CGCCTGCGCA GGCAGCGGCG ATTCCAGACG
GCGATGGCCT TCGGCCTCGT CCTGCTGGGG CCGGTGCTGG CGCTGGCGAC CTTCCTTGCA
TTGGGGCCGA TGAATCAGGG GGCGAATTCG CCCTCGCTGC GATTCGTGCT GCTGGCCGAT
CTGGTCTACG TCCTCGCGGT GGCGGCGCTG GTGATCGCGC GGATCGCCCG CATGGTCTCG
GACCGGCGCA GCCAGTCGGC GGGCTCGCGG CTGCATCTGC GGCTGGTGGG CACCTTCGCG
GGGCTCGCGC TCGTGCCCAC CATCCTCGTC GCGGTCTTCG CGATGCTCAC GGTGAACGTG
GGTCTGGAGG GCTGGTTCTC TGAGCGGGTG CGGCAGGTGG TGGGGGCCTC GCTCGAGGCA
GCCGAGGCCT ATCAGGAAGA GCACCGCCGC GATCTGATCG AGGATGCCGA GGCGCTGGCG
GCCTATCTCA ACGTGGCCAA GCAATCGACC TTCTTCCTGC GCGACGACCA GCTGCGGCCG
CTTCTCACGC AGGGACAGGA GAAGATCCAG CGCGGCCTGC GCGAGGCCTT CCTGATCGAT
GGCAGCGGCG TGCTCCGCAC CCGGGGCGAA CGCAGCTATC TCTTCGATTT CGAGCAGCCC
GATGCCACCG ACATCGAGCG GGCGCGCGCG GGCCAGACGG TCCTGATCCA GGACTGGGCC
AACAACGAAT TCCGCGCCCT CGTCCATCTC ACGGCCTTCC CCGACCGCTT CCTCTATGTC
TCGCGCACGG TGGACGGCTC GATCCTGAGC CTGCTCGACG ATACGCGCGA GACGGTGGTG
CTCTATCATC AGCTGGAAGC CGAGCGCGGG CGGATGCTGT TCGAGTTCGG GCTGCTCTAC
CTCGGCTTCG CGCTGATCCT GATCCTTGCC GCCGTCTGGC TGGGGTTCTG GTTCGCCGAG
CGGCTGTCGC GCCCCGTGGG GCGGCTCGCA GGGGCTGCGC AGCGCGTGGG TGCGGGCGAT
CTCGACGTGC AGGTGCCCGA GGAGGAGGGC GACGACGAGA TCGCGATGCT GGGCCGGCTC
TTCAACCAGA TGACCCGGCA GCTGAAGGGC CAGCGCGACG CGCTGATGGA CAACAACCGC
CAGACCGAGC GGCGGCGGCG GCTGTTCGAC TCGGTGCTCT CCTCGGTCAC GGCGGGGGTG
ATCGGGCTCG ACGCGGTGGG GCAGGTCGAT TTCATCAACC GCGCCGCCCA GCGGCTGCTC
GAACTGCCGC AGGCGGGCAA CATGTCCCTG TCCACCGCCG TGCCGGAGTT CGCGGCCCTC
TTCGCGCGGC TGCGCGAGAC GGGGGCGGCC GTGCAGGAGG AGATCCGCCT GATCCGCAAG
GGCCGGATGG AGAGCCTTCT CGTCCGCATG AGCCCGCGGC GCAACGAGAG CGGCCGGCTC
GAAGGCTATG TGGTGGCCTT CGACGACGTG ACCGACCTCG TCTCGGCGCA GCGGATGGCC
GCCTGGGGCG ACGTGGCGCG GCGCATCGCG CATGAGATCA AGAACCCGCT GACGCCGATC
CAGCTCTCGG CCGAGCGGAT CAAGCGCAAG TTCCGCCCGC TCGTGGGCGA GCAGGCGGGC
GATCTCGACC AATATTCCGA TGTCATCATC CGCCAGACCA ACGATCTGCG CCGTATCGTG
GACGAATTCT CGAAATTCGC CCGGATGCCC GAGCCCGACC GGCGCGAGGC GGATCTCGTG
AAGCTCGTCC GCGACGCGGT GGTGCTGCAG GAGGCGGGCC AGCCCGAGGT GCGGATCGAG
GCGCGGCTGC CGTCGGATCC CTGGCCCATC GACATCGACA CGACCATGAT CGGGCAGGCC
TTGACCAACC TGATGAAGAA CGCGGGCGAG GCGATCGAGG CCCGCCGCGA GGCGGAAGGT
CAGGGGTTCG AACCCGAGAT CCGCGTCTCG CTTACGGTCA ACGAGGATCA GGCGCTGCTG
CGCATCGCCG ACAATGGCAC GGGGCTTCCG CCCGACCGGA CGCGGCTCTT CGAACCCTAT
GTCACCACGC GTGAGAAGGG CACCGGCCTC GGCCTGCCCA TCGTGAAGAA GATCATCGAG
GAACATGGCG GCATCCTGAC GCTCAGCGAT GCCGACCCCT TCACCCATGA CGGCCACCGC
GGGGCCATGG CCGAGATCCG GCTGCCCCGC ATCCTGCGCA GCCGGGCGCG GGCCGCGAAG
ACCGGCGAGG CGAGACCGGA GGACACATGA
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| Protein sequence | MGRAAQPPPE RRDRLSVRTA VRSNTWIKLA RLRRQRRFQT AMAFGLVLLG PVLALATFLA
LGPMNQGANS PSLRFVLLAD LVYVLAVAAL VIARIARMVS DRRSQSAGSR LHLRLVGTFA
GLALVPTILV AVFAMLTVNV GLEGWFSERV RQVVGASLEA AEAYQEEHRR DLIEDAEALA
AYLNVAKQST FFLRDDQLRP LLTQGQEKIQ RGLREAFLID GSGVLRTRGE RSYLFDFEQP
DATDIERARA GQTVLIQDWA NNEFRALVHL TAFPDRFLYV SRTVDGSILS LLDDTRETVV
LYHQLEAERG RMLFEFGLLY LGFALILILA AVWLGFWFAE RLSRPVGRLA GAAQRVGAGD
LDVQVPEEEG DDEIAMLGRL FNQMTRQLKG QRDALMDNNR QTERRRRLFD SVLSSVTAGV
IGLDAVGQVD FINRAAQRLL ELPQAGNMSL STAVPEFAAL FARLRETGAA VQEEIRLIRK
GRMESLLVRM SPRRNESGRL EGYVVAFDDV TDLVSAQRMA AWGDVARRIA HEIKNPLTPI
QLSAERIKRK FRPLVGEQAG DLDQYSDVII RQTNDLRRIV DEFSKFARMP EPDRREADLV
KLVRDAVVLQ EAGQPEVRIE ARLPSDPWPI DIDTTMIGQA LTNLMKNAGE AIEARREAEG
QGFEPEIRVS LTVNEDQALL RIADNGTGLP PDRTRLFEPY VTTREKGTGL GLPIVKKIIE
EHGGILTLSD ADPFTHDGHR GAMAEIRLPR ILRSRARAAK TGEARPEDT
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