| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2835 |
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| Symbol | ispD |
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| ID | 3720551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1475793 |
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| End bp | 1476470 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640070997 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_352876 |
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| Protein GI | 77463372 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACAG CCGCAATCAT CGTCGCCGCC GGACGCGGCA CACGCGCGGG CGGAGACCTG
CCGAAACAGT GGCAGCCGCT GGCGGGCCGG CCGGTGCTGG CCCATACGCT GGCGGCCTTC
CGGGCCGCGG CCGGGGTGAG CCGCACCCTC CTCGTCATCC ACCCTGACGA CCGCGCCCGG
GCTGAAGCGC TTCCGGGCGT GGCCGAGGGC AAGGTCGAAC TCGTCGAGGG CGGCGCCTCG
CGCGACGCCT CGGTGCGCAA TGCGCTCGAG GCGCTGGCCG GGGCAGGAAT CGAGCGGGTG
CTGATCCATG ACGGCGCGCG CCCCCTCGTG GCGCCCGAAC TGATCGCGCG CACGCTCGCC
GCCCTCGAGA CGGCGCCGGG CGCCGCGCCC GCCGTGCCCG TCTCGGATGC GCTCTGGCGC
GGCGAAGGCG GCCGCGTCGT GGGCACGCAG GACCGCACCG GCCTCTTTCG CGCGCAGACC
CCGCAGGCCT TCCGCTATGA GGCGATCCTT GCCGCCCACC GCGCCCATCC CGGCGGGGCC
GCCGACGATG TCGAGGTGGC CCGCGCGGCC GGGCTCGAGG TGGCCATCGT CGAGGGCTGC
GAGGACAATC TGAAAGTGAC TTATCCCGGC GATTTCGCGC GGGCCGAGCG GCTGCTCGCG
CTTGCGGCCG GGCTCTGA
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| Protein sequence | MTTAAIIVAA GRGTRAGGDL PKQWQPLAGR PVLAHTLAAF RAAAGVSRTL LVIHPDDRAR
AEALPGVAEG KVELVEGGAS RDASVRNALE ALAGAGIERV LIHDGARPLV APELIARTLA
ALETAPGAAP AVPVSDALWR GEGGRVVGTQ DRTGLFRAQT PQAFRYEAIL AAHRAHPGGA
ADDVEVARAA GLEVAIVEGC EDNLKVTYPG DFARAERLLA LAAGL
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