| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2819 |
|---|
| Symbol | cobF |
|---|
| ID | 3720571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1492560 |
|---|
| End bp | 1493324 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640071017 |
|---|
| Product | precorrin 6A synthase |
|---|
| Protein accession | YP_352894 |
|---|
| Protein GI | 77463390 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR02434] precorrin-6A synthase (deacetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.632211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGC TTCTTCTCAT CGGGATCGGA ACCGGCAACC CGGACCATCT GACCGCCGAG
GGCCGGCGGC GGATGGCCGA GGCCGACCTG ATCCTCGTGC CGCGCAAGGG GCGCGACAAG
TCGGACCTGG CCGAGATCCG CCGCGCGATC TGCGCCGACG CGGCCCCCCT TGTCCCGGTG
GCCGAGTTCG ATCTGCCCGT GCGCGATGCG GCCAACCCCG ACTACCGTCA GGGCGTCGAG
GACTGGCACG ATGCCATCGC GCTCGCCTGG GCACGCGCGG CGGGCGGCGC GGCCCGGGTG
GCGCTGCTGA TCTGGGGCGA TCCGTCGCTC TACGATTCGA GCCTGCGCAT CGCGGCGCGG
CTCGATCCGG CGCCACAGGT GCGCGTCGTG CCGGGGATCA CGGCAATTCA GGCGCTCTGC
GCGGCCCATG CGATCCCGCT GAATGCGGTG GGCGCGCCGG TGCTGGTCAC CACCGGTCGG
CGGTTGAGGG ACGAGGGCTG GCCCGCGGGC GTCGACCGTT TGGCCGTGAT GCTCGACGGC
GAGACGAGTT TTCGCGGCCT CGATCCGCAG GGCGTGCGGA TCTGGTGGGG CGCCTATCTC
GGAATGGCGG AGCAGATCCT CGAGGCGGGA CCGCTGGCCG AGGCCGGCCC GCGCATCCTC
GCCACCCGTG CCGCCGCGCG CGCGCGCCAT GGCTGGATCA TGGATATCTA TCTCCTCGAC
CGCGAGACCG ATGATCGGCG CAAGGACGGT TCGGGAGAGA CCTGA
|
|---|
| Protein sequence | MRELLLIGIG TGNPDHLTAE GRRRMAEADL ILVPRKGRDK SDLAEIRRAI CADAAPLVPV
AEFDLPVRDA ANPDYRQGVE DWHDAIALAW ARAAGGAARV ALLIWGDPSL YDSSLRIAAR
LDPAPQVRVV PGITAIQALC AAHAIPLNAV GAPVLVTTGR RLRDEGWPAG VDRLAVMLDG
ETSFRGLDPQ GVRIWWGAYL GMAEQILEAG PLAEAGPRIL ATRAAARARH GWIMDIYLLD
RETDDRRKDG SGET
|
|---|
| |