Gene RSP_2709 details

Gene Information

• Locus tag: RSP_2709
• Symbol: dxr
• ID: 3720438
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 1357368
• End bp: 1358552
• Gene Length: 1185 bp
• Protein Length: 394 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640070884
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: YP_352764
• Protein GI: 77463260
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0515377
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCAGCC TGTCGATCTT TGGGGCCACC GGCTCCATCG GCGAATCCAC CTTCGACCTC 
GTCATGCGGA AGGGCGGGCC CGAGGCGTTC CGCACCGTCG CTCTGACCGG CGGGCGCAAC 
ATCCGGCGGC TCGCCGAAAT GGCGCGCGCG CTGAAGGCGG AGCTTGCCGT CACCGCGCAT 
GAGGATTGCC TGCCCGCGCT GCGCGAGGCG CTGGCCGGGA CGGGCACCGA GGTCGCGGGC 
GGGGCGCAGG CCATCGCCGA GGCCGCCGAC CGGCCCGCCG ACTGGACCAT GTCGGCCATC 
GTGGGCGCCG CGGGCCTCGT GCCCGGAATG CGGGCGCTGA AGCACGGCCG CACGCTGGCG 
CTCGCCAACA AGGAAAGCCT CGTGACGGCA GGGCAGCTCC TGATGCGGAC GGCCCGGGAG 
AACGGCGCCA CGATCCTGCC GGTGGACAGC GAGCACTCCG CGGTCTTTCA GGCGCTGGCG 
GGCGAGGACA CGGCCTGCGT CGAGCGCGTC ATCATCACGG CGTCCGGCGG GCCGTTCCGC 
GACTGGAGCC TCGAGCGCAT CCGCGCCTGC ACCGTGGCCG AGGCGCAGGC CCATCCCAAC 
TGGTCCATGG GCCAGCGCAT CTCCATCGAC AGCGCCTCGA TGTTCAACAA GGCGCTCGAG 
CTGATCGAGA CGCGCGAATT CTTCGGCTTC GAGCCGGACC GGATCGAGGC GGTCGTTCAT 
CCGCAATCCA TCGTTCATGC CATGGTGGGC TTCTGCGACG GCGGCCTGAT GGCCCATCTC 
GGGCCGGCCG ACATGCGCCA CGCCATCGGA TTCGCGCTGA ACTGGCCGGG TCGCGGCGAG 
GTGCCCGTCG CCCGGATCGA CCTCGCACAG ATTGCGAGCC TCACCTTCCA GAGGCCTGAC 
GAGGAACGCT TTCCTGCCCT GAGGCTTGCG CGAGACGTCA TGGCGGCGCG CGGCCTGTCG 
GGCGCCGCCT TCAACGCGGC CAAGGAGATC GCGCTCGATC ATTTCATCGC CGGTCGCATC 
GGGTTTCTGG ACATGGCGGC GGTGGTCGAG GAGACGCTCG CGGGCGTTTC GACCGATCCG 
CTGTTCGGAA AAGTGCCCGA CGCCCTTGAG GAAGTGCTGG CCATGGACCA TCTCGCTCGG 
AGAGCGGCAG AGGAAGCCGC CGGTCTCCGC CAGCAGAAAA GGTAG 

 

Protein sequence

MRSLSIFGAT GSIGESTFDL VMRKGGPEAF RTVALTGGRN IRRLAEMARA LKAELAVTAH 
EDCLPALREA LAGTGTEVAG GAQAIAEAAD RPADWTMSAI VGAAGLVPGM RALKHGRTLA 
LANKESLVTA GQLLMRTARE NGATILPVDS EHSAVFQALA GEDTACVERV IITASGGPFR 
DWSLERIRAC TVAEAQAHPN WSMGQRISID SASMFNKALE LIETREFFGF EPDRIEAVVH 
PQSIVHAMVG FCDGGLMAHL GPADMRHAIG FALNWPGRGE VPVARIDLAQ IASLTFQRPD 
EERFPALRLA RDVMAARGLS GAAFNAAKEI ALDHFIAGRI GFLDMAAVVE ETLAGVSTDP 
LFGKVPDALE EVLAMDHLAR RAAEEAAGLR QQKR