| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2633 |
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| Symbol | ccmF |
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| ID | 3720323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1273029 |
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| End bp | 1274999 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640070810 |
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| Product | cytochrome c maturation protein, CcmF |
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| Protein accession | YP_352690 |
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| Protein GI | 77463186 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0466385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTCG AACTCGGCCA TTTCGCGCTG GTGCTGTCGC TGGCTGTGGC CCTTGTGCAG
TCCGTGGTGC CGCTCGTCGG CGCGGATCGG CGCTGGTCTG GCTGGATGGC GGTGGCCGAA
CCCGCGGCGG TCACCCAGCT TCTGCTGATC GGCTTCTCCT TCGCCGCGCT GACCTGGGCC
TTCGTGACCT CGGATTTCTC GGTGCGCCTC GTGGTGCTGA ACTCGCACAC GCTGAAGCCC
ATGCTCTACA AGATCAGCGG CGTCTGGGGG AACCACGAGG GCTCGCTGCT CCTGTGGGTG
CTGATCCTCG CGCTGTTCGG AGCCTGCGCC GCGGTCTTCG GGCAGAACCT GCCGCCCACG
CTCAAGGCGC GCGTGCTGGC GGTGCAGGGG ATGATCGGCG CGGCCTTCCT GGCCTTTCTC
CTCTTCACCT CGAACCCGTT CCTGCGCATG GGCGAGGTGC CCTTCGACGG CGAGGATCTG
AACCCGCTCC TGCAGGATCC GGGCCTCGCC TTCCACCCGC CCTTCCTTTA CCTCGGCTAT
GTCGGCCTCT CGATGGCCTT CTCCTTCGCG GTGGCGGCCC TGATCGAGGG CCGCGTCGAT
GCCGCCTGGG GCCGCTGGGT CCGGCCCTGG ACGCTCGCCG CCTGGGTGTT TCTCACCATC
GGCATCGCGC TCGGCTCCTG GTGGGCCTAT TACGAGCTCG GCTGGGGCGG CTTCTGGTTC
TGGGACCCGG TCGAGAACGC CTCCTTCATG CCCTGGCTGA TCGCGGCGGC GCTGCTCCAC
TCTGCCATCG TGGTCGAGAA GCGCGAAGCG CTGAAGAGCT GGACGATCCT GCTGGCCATC
CTCGCCTTCG GCTTCTCGCT CATTGGCACC TTCATCGTGC GCTCGGGCGT CATCACCTCC
GTCCATGCCT TCGCCAACGA TCCCGAGCGC GGGATCTTCA TCCTGATGAT CCTCGCGGTC
TTCATGGGCG GGGCGCTCAC GCTCTTCGCC GCGCGGGCGA GCGCCATGGA GGCCAAGGGG
GTCTTCGGCA TCGTCAGCCG CGAGTCGGGC CTCGTGCTGA ACAACGTGCT GCTGACGGTG
GCCTGTTTCG TGGTCTTCAT CGGCACGATC TGGCCGCTCC TGGCCGAACT CCTCTGGGGC
CGCAAGCTGT CGGTGGGTGC TCCGTTCTTC AACGCGGCCT TCACCCCCTT CATGGTGGTG
ATCGCCCTCG TCCTGCCTCT GGGCGCCGTC CTGCCCTGGA AGCGGGCCGA GCTCGGCCGC
GGGATGCGGC CGCTCTGGGG GGCGCTCGCG CTCTCGGCGG CCCTGGGTGC GCTGGTCTTC
GCGCTGCAGA CGGGCCGGTC GGCGCTCGGG CCCGTCGGCC TCGCGCTCGG CGCCTGGCTC
GTCTTCGGCA CGCTCCTCGA CCTCTGGGGC CGCACCGGGC GCGGCGCGCT CGGCGGGCGG
CTCGCGCGCC TCCGGCGACT GCCGCGCGCG GACTGGGGCA AGGCCACTGC CCATGCGGGC
CTCGGCGTCA CGATCTTCGC CGTGGCGGCC ATCACCGCCT GGCAGGTCGA GTCGATCCGC
GTGATGAAGC CGGGCGAGAC CTTCGCCCTC GGCCGCTACG ACGTCCTGCT CGAGGGCGTG
CGCGAGATCG AGGGGCCGAA CTACCGCTCG ACCGTGGCCG ACTTCCGCGT GACCCGCGAC
GGGGCCGAAG TGGCGACACT CCATCCCGAG AAGCGCGTCT ATCCGGTGGC CGCCATGCCC
ACGACGGAAG CCGCCATCGA CTACGGCTTC ACCCGCGACC TCTACCTCGT GATCGGCGAC
CCGCAGGAGG GCGGCGGCTA TGCGGTGCGC AGCTACATCA AGCCCTTCGC CAACTGGATC
TGGGGCGGCG CGCTGCTGAT GGCGCTCGGC GGGCTGCTGA GCCTCTCGGA CCGCCGCTAC
CGCATCGCCG CCGGGGCGCG CCGGATGCCG GCCGCGGTGG CTGCAGAATG A
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| Protein sequence | MIVELGHFAL VLSLAVALVQ SVVPLVGADR RWSGWMAVAE PAAVTQLLLI GFSFAALTWA
FVTSDFSVRL VVLNSHTLKP MLYKISGVWG NHEGSLLLWV LILALFGACA AVFGQNLPPT
LKARVLAVQG MIGAAFLAFL LFTSNPFLRM GEVPFDGEDL NPLLQDPGLA FHPPFLYLGY
VGLSMAFSFA VAALIEGRVD AAWGRWVRPW TLAAWVFLTI GIALGSWWAY YELGWGGFWF
WDPVENASFM PWLIAAALLH SAIVVEKREA LKSWTILLAI LAFGFSLIGT FIVRSGVITS
VHAFANDPER GIFILMILAV FMGGALTLFA ARASAMEAKG VFGIVSRESG LVLNNVLLTV
ACFVVFIGTI WPLLAELLWG RKLSVGAPFF NAAFTPFMVV IALVLPLGAV LPWKRAELGR
GMRPLWGALA LSAALGALVF ALQTGRSALG PVGLALGAWL VFGTLLDLWG RTGRGALGGR
LARLRRLPRA DWGKATAHAG LGVTIFAVAA ITAWQVESIR VMKPGETFAL GRYDVLLEGV
REIEGPNYRS TVADFRVTRD GAEVATLHPE KRVYPVAAMP TTEAAIDYGF TRDLYLVIGD
PQEGGGYAVR SYIKPFANWI WGGALLMALG GLLSLSDRRY RIAAGARRMP AAVAAE
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