Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2569 |
Symbol | sqdB |
ID | 3720202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1213444 |
End bp | 1214658 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640070746 |
Product | UDP-sulfoquinovose synthase |
Protein accession | YP_352627 |
Protein GI | 77463123 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.410099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCG CAGTTCTGGG TGGGGACGGG TTTGTCGGCT GGCCGACGGC GCTCCACCTG TCGGACCTCG GACACGAGAT CCATATCGTC GACAACCTGT CCCGGCGCTG GATCGATACC GAGCTGGGCG TGCAGTCCCT GACCCCGATG GACTCGATCC AGGAGCGCTG CCGGATCTGG CATCAGGAGA CCGGCCAGCG GCTGCATTTC CACCTGCTCG ACCTGCGCGA ATACGACCGG ATCCGCGCCT GGCTCGCCGA ATACCGCCCC GAGGCCATCA TCCACTTCGC CGAGCAGCGC GCCGCGCCCT ATTCGATGAA GTCGGACCGC CACAAGGTCT ACACCGTCAA CAACAACGTC AATGCGACCC ACAACCTGTT GGCCGCCATG GTCGAGACCG GCATCGATGC CCATCTCGTC CATCTCGGCA CCATGGGGGT CTATGGCTAT TCGACCGTGG GCGCGCCCAT CCCCGAGGGT TATCTCGACG TCTCGGTCGA GACCCCGGCG GGCCCGAAAG AGCTCGAGAT CCTCTATCCG ACGCGGCCGG GCTCGGTCTA TCACATGACC AAGAGCCTCG ATCAGATCCT CTTCCAGTAT TATGCTCAGA ACGACGGGCT GCGGATCACC GACCTGCATC AGGGCATCGT CTGGGGCACG CACACGAACC AGACCCGCCG CCATCCGCAG CTCATCAACC GCTTCGACTA TGACGGCGAC TATGGCACCG TCCTGAACCG CTTCCTGATC CAGTCGGCGA TCGGTTATCC GCTGACCGTG CACGGCACCG GCGGGCAGAC CCGCGCCTTC ATCCATATCC AGGATTCGGT GCGCTGCGTC GAGCTCGCGC TGTCGGATGC GCCCAAGGCC GGCGAACGGG TGAAGATCTT CAACCAGATG ACCGAGACGC ACCGCGTGCG AGATCTGGCC GAACTGGTGG CGAAGATGAC CGGCGCCAAG GTCTCGTTCC TGCCCAACCC CCGCAAGGAG GCCGACGAGA ACGAGCTCGT GGTCAGGAAC GACCAGTTCC TCGCGCTGGG GCTGAAGCCC ATCACGCTGC AGGAAGGGCT GCTGGGCGAG GTGGTCGATG TGGCGAAGAA GTTCGCCCAC CGGATCGACC GCAGCCGCGT GCCCTGCGTC TCGGCCTGGA CGAAGGACAT CGCGCAGCGG GTCGAGCACG ATCCCGAGGG GCGGCGGCTG CGCTCGGTGT CCTGA
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Protein sequence | MRIAVLGGDG FVGWPTALHL SDLGHEIHIV DNLSRRWIDT ELGVQSLTPM DSIQERCRIW HQETGQRLHF HLLDLREYDR IRAWLAEYRP EAIIHFAEQR AAPYSMKSDR HKVYTVNNNV NATHNLLAAM VETGIDAHLV HLGTMGVYGY STVGAPIPEG YLDVSVETPA GPKELEILYP TRPGSVYHMT KSLDQILFQY YAQNDGLRIT DLHQGIVWGT HTNQTRRHPQ LINRFDYDGD YGTVLNRFLI QSAIGYPLTV HGTGGQTRAF IHIQDSVRCV ELALSDAPKA GERVKIFNQM TETHRVRDLA ELVAKMTGAK VSFLPNPRKE ADENELVVRN DQFLALGLKP ITLQEGLLGE VVDVAKKFAH RIDRSRVPCV SAWTKDIAQR VEHDPEGRRL RSVS
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