Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2550 |
Symbol | exoK |
ID | 3720184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1193730 |
End bp | 1194512 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640070728 |
Product | endo-beta-1,3-1,4-glycanase protein |
Protein accession | YP_352609 |
Protein GI | 77463105 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.616769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCCC GTCAGACCCT TCTGCGCCGC TGCCTTGCGG CGAGCCTGCC CCTTCTCCTC GCCCTGCCCG CTGCGGCGCA GGACGGGCCC GCCTCCTTCC GCGAGGATTT CGACCGCATC AACGGCAAGC GCTGGTTCAT CTCGGACGGC TGGACCAACG GCCCGCACCA GAACTGCGAC TGGTCGCAGA AGGCGGTGCG CGCCGATGAC GGCATCCTGA AGCTAATGTA TTTCACCGAC CCCTCGGGCC AGGGCAAGAA CCGCTGTTCG GAGATCCAGA CGCAGGAGCG CTACCTGCAT GGCACGTTCG AAGCCCGCGT GCGCACCGAT CACCGGGCTT CGGGGCTGAA TGCGGCCTTC TTCAGCTACA TCGGCCCCGT CCATGGCGAG CCCCATGACG AGATCGATTT CGAGATCCTG ACCCGCAACA CCTCTTCGGT CGATGTGAAC ACCTATGTCT CGGGCGAGCC GAAGAACGGG GCCAAGGTCG CGCTCGACCC GCCGACCGAC GAGGACTGGC ATACGTTCTC CTTCATCTGG GAGCCCGAGC GCATCCGCTG GTTCGTCGAT GGCAAGCTCG TCCACGAGGC GACCGAGACC CTGCCCGTGA CCGCGCAGAA GATCTTCTTC AGCCACTGGA GCACCGATGT CCTGACCGAA TGGATGGGGG CCTTCCGCGC GCCGCAGAAA CCGGTCGCGC TCGAGGTCGA TTGGGTAGCC TGGACCGCGC CGGGAGAGGC GTGCCAGTTC CCCGAATCCG TGCTATGTCA GCTGGAGAAT TGA
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Protein sequence | MSPRQTLLRR CLAASLPLLL ALPAAAQDGP ASFREDFDRI NGKRWFISDG WTNGPHQNCD WSQKAVRADD GILKLMYFTD PSGQGKNRCS EIQTQERYLH GTFEARVRTD HRASGLNAAF FSYIGPVHGE PHDEIDFEIL TRNTSSVDVN TYVSGEPKNG AKVALDPPTD EDWHTFSFIW EPERIRWFVD GKLVHEATET LPVTAQKIFF SHWSTDVLTE WMGAFRAPQK PVALEVDWVA WTAPGEACQF PESVLCQLEN
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