| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2456 |
|---|
| Symbol | radA |
|---|
| ID | 3720072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1097519 |
|---|
| End bp | 1098877 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640070636 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_352517 |
|---|
| Protein GI | 77463013 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CCTCCCCCGT CTTCACCTGC CAGACCTGCG GCGCCGTCCA CCGCAAGTGG
GCCGGGCGCT GCGACGCCTG CGGCGCCTGG AACTCGATCG TCGAGGAAAC GCCTTTGTCG
AGCGGGCCGA AGGCACTGGG CTCCAAGGGC CGCACCATCG CGCTGAGCGA CCTCGCGACC
GAAGAGGCGG CGCCGCCGCG CACCTCCTCG GGCATCGACG AGCTCGACCG CGTGCTGGGC
GGCGGCCTCG TGCCCGCCTC GGCGATCCTC GTGGGCGGCG ATCCCGGCAT CGGCAAGTCG
ACCCTCCTTT TGCAGGCCGC GGCGAGCTTC GCCAATGGCG GGGTGAAGTG CCTCTATATC
TCGGGCGAGG AGGCGGCGGC GCAGGTGCGG ATGCGCGCCC AACGGCTCGG CCTCGGACAG
GCGCCGGTGG CTCTCGGCGC CGAGACCAAC CTGCGCGACA TCCTGACCAC GCTCGACGCC
GAGCGCCCGG CGCTGGCCAT CATCGACTCG ATCCAGACCA TGTGGCTCGA CAATGTGGAA
TCCGCCCCCG GCTCGGTGGC GCAGGTCCGC GCCTCGGCCC ACGAACTCGT GACCTTCGCC
AAGCGGCGCG GCGTGGCCAT CGTCATCGTG GGCCATGTGA CGAAGGAGGG CCAGATCGCG
GGCCCGCGCG TCGTCGAGCA TATGGTCGAT ACGGTGCTCT ATTTCGAGGG CGAGCGCGGC
CACCAGTTCC GCATCCTGCG CGCGGTCAAG AACCGCTTCG GCCCGGCCGA CGAGATCGGC
GTCTTCGAGA TGACGGGCGG CGGGCTCGCG CAGGTCGCGA ACCCCTCCGC CCTCTTTCTG
TCCGACCGCG ACCAGCCCGC GCCGGGCTCG GCCGTCTTCG CGGGCATCGA GGGCACCCGC
CCCGTCCTCA CCGAGATCCA GGCCCTCGTC TCGCCCTCGC CGCTCGGCAC CCCGCGCCGG
ACGGTGGTGG GCCTCGACAG CGGCCGGCTC TCGACCATCC TCGCCGTCCT CGAGGCGCGC
TGCGGTATCC CCTTCGCGGG CCTCGATGTT TTCCTCAACG TGGCGGGCGG GATGCGCGTC
TCCGAGCCTG CGGCCGACCT CGCCGTGGCC GCGGCCCTCG TCTCGGCCCG CGAAGATGTG
GCAATTCCGC CCGACATGGT GCTTTTCGGC GAGATCTCCC TCTCGGGTGC CCTCCGCCCG
GTGGCCCAGA CCGAAAGCCG CTTGAAAGAG GCCTCGAAAC TTGGTTTCTC GCAGGCAATC
GCGCCGACCC GCTCGAAAGT GGGTCAGGAC GAGGGAATGC GGGTGCGTCA GATGCCCGAC
CTCGCGGCAT TCGTGGGTGA GATGTTCGGG GCCGGGTAA
|
|---|
| Protein sequence | MAKSSPVFTC QTCGAVHRKW AGRCDACGAW NSIVEETPLS SGPKALGSKG RTIALSDLAT
EEAAPPRTSS GIDELDRVLG GGLVPASAIL VGGDPGIGKS TLLLQAAASF ANGGVKCLYI
SGEEAAAQVR MRAQRLGLGQ APVALGAETN LRDILTTLDA ERPALAIIDS IQTMWLDNVE
SAPGSVAQVR ASAHELVTFA KRRGVAIVIV GHVTKEGQIA GPRVVEHMVD TVLYFEGERG
HQFRILRAVK NRFGPADEIG VFEMTGGGLA QVANPSALFL SDRDQPAPGS AVFAGIEGTR
PVLTEIQALV SPSPLGTPRR TVVGLDSGRL STILAVLEAR CGIPFAGLDV FLNVAGGMRV
SEPAADLAVA AALVSAREDV AIPPDMVLFG EISLSGALRP VAQTESRLKE ASKLGFSQAI
APTRSKVGQD EGMRVRQMPD LAAFVGEMFG AG
|
|---|
| |