| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2451 |
|---|
| Symbol | |
|---|
| ID | 3720047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1090065 |
|---|
| End bp | 1091882 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640070631 |
|---|
| Product | putative 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_352512 |
|---|
| Protein GI | 77463008 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGA CCATCGAAGA CAGGGCGGCC GAGTTCGCCA TCCAGCCCAG CTATCACGCG
CTCGGCGGCG AATTCGTCCG CGCGCCGGTC GAGACGCTGC GCGAAATGCT CGGCGCCTTC
GGCATCTCGC TGGACGGACC GCCGCCCGAC CGGGCGCCGC CCGAGATGCG GGCGCCCGAC
GGCTACCGCT GCTTCCTGCC CGAGGGCGAG ATGCGCCGCT GGGGCATCGC CGCGCAACTC
TACCAGCTGA GGTCCGAGCG CAACTGGGGC ATCGGCGACT TCGCCGATCT CTGCGATCTG
GCGCGGATCG GAGGCGCCGC GGGGGCCGAT TTCATCGGCC TCAACCCGCT CCACGCCCTG
TTTCTGGCCA ATCCTGCCCA CACCAGCCCC TTCTCGCCCT CGAACCGGCG CTTCCTGAAC
CCGCTCTATA TCGCGGTCGA CCGCGTGCCG GGCTACAGGC CCGAGTTCGC GCCCGAAGGG
CTGGGTCAGC TCCGCGCGCC GGATCTCGTC GATTATCCGG CGGTGGCCGC AGCCAAGCTC
GGCGCGCTGC GCCGTCTGTG GCGCGAGGGG CCGGACGATG CGATGGGCTT CATGCGCTTC
TGCGCCGAGG GCGGCGAGCT CCTGCGTCGC CACGCGCTCT TCGAGGCGAT CTCGGGCCAG
ATGGTGGCGG ACGGCTACGG CGCGGGCTGG CTCGGCTGGC CGGTGGAGTT CCACGATGCC
GAGGGCCAGG CCGTCATCGA CTTCGCCGAC GCGCGGGGCG ACGAGGTGGG CTTCCACCTC
TGGCTGCAGT GGATCGCCGA CCGGCAGCTC GAAGAGGCGC GCGATGCCTG CCGCGCCGCC
GGGATGAAGA TCGGGCTCTA TCTCGACTTC GCCGTGGGCG AGGTGCCGGA CGGCTCGAGC
ACCTGGTCGG ACCCGAGCCT TGCCGTGCCG GGTCTCCGGA TCGGCGCCTC GCCCGACTGG
TTCAACGCGC AGGGGCAGGA CTGGGGTCTG GCACCCCTCT CTCCGGTGAA GCTCGCCGAT
CTGCGAGCCG CGCCCTTCGG GGCGCTGATG CAGGATGCCA CGCGCCGCGC CGGCGCGCTG
CGGATCGACC ATGCGATGGG CGTCTGGCAG CTCTTCCTCA TCCCCGACGG AATGGGCGCA
CCGCAGGGCA CCTATGTGCG CTATCCGATC GAGGACATGC TGCGCGCGCT GGCCGAAGCC
TCGTGCCGCA ACCGCACCAT CGTGATCGGC GAAGACTTGG GCAACGTGCC CGACGGCTTC
CGCGAGCTGA TGGCGCGGAT GAACATCCTC TCCTACCGCA TCCTGCTCTT CGAGCGGCAC
GACCACGGCT ATATCGCGCC AGAGCATTAT CCGCGTGAGG CGCTCGTGTG CCTCTCCACC
CACGACCTGC CCACCTTCCG CGGCTGGTGG CGGGGCGACG ATGTGGCGAT CCGGCGCGAC
TTCCGCCTGA TCTCGGACGA GGCAGCCCGC CAGCAGGGCG ACTTCCGCTG GACCGAGCGG
CGCCAGCTGC TCGAGGATCT GGCGCGGGCG GGCCTGATGG CGTGGGACGA GATCGACCGG
ATCGGCCCCG ACGATCCGCC CGAGGCGCTG GTCGTGGCGG TGCACCGCCA TCTCGCCCGC
GCGCCCTCGC GCCTCTTCGC GGTCCGGATC GAGGACATGG CGGGCGAGGT GGCCCCGGTG
AACGTGCCCT CGACCGTGGA CGAACATCCC AACTGGCGGC GCAGGCTCGG CGTGCCGCTG
GAGGCTCTGG GCGAGACCGC ACTGTTCCGC GGCATCGCCG GAGCCCTTGA AGCCGAGCGA
CCAAGGGAGC CCTCATGA
|
|---|
| Protein sequence | MSRTIEDRAA EFAIQPSYHA LGGEFVRAPV ETLREMLGAF GISLDGPPPD RAPPEMRAPD
GYRCFLPEGE MRRWGIAAQL YQLRSERNWG IGDFADLCDL ARIGGAAGAD FIGLNPLHAL
FLANPAHTSP FSPSNRRFLN PLYIAVDRVP GYRPEFAPEG LGQLRAPDLV DYPAVAAAKL
GALRRLWREG PDDAMGFMRF CAEGGELLRR HALFEAISGQ MVADGYGAGW LGWPVEFHDA
EGQAVIDFAD ARGDEVGFHL WLQWIADRQL EEARDACRAA GMKIGLYLDF AVGEVPDGSS
TWSDPSLAVP GLRIGASPDW FNAQGQDWGL APLSPVKLAD LRAAPFGALM QDATRRAGAL
RIDHAMGVWQ LFLIPDGMGA PQGTYVRYPI EDMLRALAEA SCRNRTIVIG EDLGNVPDGF
RELMARMNIL SYRILLFERH DHGYIAPEHY PREALVCLST HDLPTFRGWW RGDDVAIRRD
FRLISDEAAR QQGDFRWTER RQLLEDLARA GLMAWDEIDR IGPDDPPEAL VVAVHRHLAR
APSRLFAVRI EDMAGEVAPV NVPSTVDEHP NWRRRLGVPL EALGETALFR GIAGALEAER
PREPS
|
|---|
| |