| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2448 |
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| Symbol | glgB1 |
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| ID | 3720044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1084044 |
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| End bp | 1086230 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070628 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_352509 |
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| Protein GI | 77463005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGA CATCGAAGCC CGGGGAGCTC GTCCCCGAAA GCGACGTGGC CGCCATCATG
CGCGGAACGC ACGGAGATCC CTTCCGCGTG CTGGGCATGC ACGGAGGCGG CGGCGCGCCG
CTCTCCGTCC GGGTCTTCGC CCCGCAGGCC GCGGAGGTTG CGGTGCTGGG GCAGGGGGGC
GAGGTGCTCG CCCCTCTCGA ACGCATCGGC GCCGAGGGCT TCTTCGCGGG CACGGTGCCG
GGCGAGGAGA AATTCCCCTA CCGCCTCCGC TTCGTCTCGG GACCGCACGA GTGGGAGGCG
GACGATCCCT ACCGCTTCCC CGAGGTGCTG GGCGAGCTCG ACGAATATCT TCTCGGCGAG
GGGCGGCACT ATCAGCTCTA CACCCGGCTC GGCGCGCATC CGGCCGAGAT CGAGGGCGTG
CAGGGGGTGA GCTTCGCTGT CTGGGCGCCG AATGCCCGCC GCGTCTCGGT GGTGGGCGCC
TTTAACGCCT GGGACGGGCG CCGCCATCCG ATGCGCAAGC GCATCGGCGT GGGTGTGTGG
GAGCTGTTCG TTCCCGGCCT CCATACCGGA GATCTCTACA AATACGAGCT GCTCGGGCCT
TCGGGCGAGC GGTTGCCGCT CAAGTCCGAT CCGCTCTCCT TCGCGCAGGA GGCGCCGCCG
GCCACGGCTT CGGTGGTCCA TGGGCTGCCC GAGGCCGAGT GGCACGATGC GGGCTGGATG
CAGGAGCGCG AGAGCCGCCA GCGCCGCGAT GCGCCGATCT CGATCTACGA GGTCCATGCG
GGCTCGTGGC GGCAGGGGCT CGATTACGAC GCGCTGGCCG AGGAACTGTC GGCCTATGTG
CGCGAGATGG GCTTCACCCA TGTGGAATTC CTGCCGATCA GCGAACATCC CTTCACCGGC
TCTTGGGGCT ATCAGCCCAT CGGGCTCTTC GCCCCCACCG CGCGCTTCGG CCCGCCCGAG
GGCTTCGCGC GGCTGGTGGA CCGGCTCCAC CGCGACGGGA TCGGCGTCAT CCTCGACTGG
GTACCGGCGC ACTTCCCGTC GGACGCCCAT GGGCTGGCCA ACTTCGACGG GACCCATCTC
TATGACCATG CCGACCCGCG GCAGGGCTTC CACCGCGACT GGAACACCCA GATCTACAAC
TTCGGCCGAC AGGAAGTGGC GAACTTCCTG CAGGCTTCGG CGCTCTTCTG GCTCGACCGC
TACCATGTCG ATGCGCTGCG CGTGGATGCG GTTGCCTCGA TGCTCTACCT CGACTATTCG
CGGAATGCCG GCGAATGGGT GCCGAACCGC CACGGCGGGC GCGAGAACCT CGAGGCGATC
GATTTCCTGC GCGGCGTGAA CGAGCGCGTC CGGCTCGACC ATCCGGGCTG CATCACCATC
GCCGAGGAAT CGACGGCCTT CCCGCAGGTG AGCCGCCCGG TCGAGGACGG CGGGCTCGGC
TTCGGCTTCA AGTGGAACAT GGGCTGGATG CACGACACGC TGGGCTACTT CCGGCGCGAC
CCGATCCACC GCAAGCACCA CCAGAACGAC CTGACCTTCG GCATGGTCTA TGCCTATTCC
GAGGATTTCG TCCTGCCCCT CAGCCATGAC GAGGTGGTGC ACGGCAAGGG CTCGCTCATC
GGGCAGATGG CGGGCGACCG CTGGCAGAAG TTCGCGAACC TTAGGGCCTA TTTCGGCTTC
ATGTGGGCGC ATCCGGGCAA GAAGCTTCTC TTCATGGGCG GCGAGTTCGC GCAGGAGCGC
GAGTGGAACC ACGATGCCTC TCTCGACTGG CACCTGCTCG ACGATCCGTC CCACGCCGGG
ATGAAGCGCC TCGTGGCCGA CCTGAACCGC GAATATCGCA AGCGCCCCGC GCTGCACCGG
ATGGATTGCG ATCCCGAAGG GTTCGAGTGG ATCGACGCCG GCGACAGCGA GAACAGCGTG
CTGAGCTTCC TGCGCAAGGC GCCCGGCGAA AAGCCGGTGC TGGCGGTCTG CAACCTCACG
CCGGTGGTGC GGTCGGATTA CCGGATCGGG GTGCCCGAGG GCGGCGAGTG GCGCGAGATC
CTCAACTCCG ACGCCGCGAT CTACGGCGGC TCGGACGTGG GCAATCCCGG CGGGCTTCAG
GCCGAGGAGT TCTCCTGGCA CGGACGGCCG GCCTCGCTGC GCCTGACGCT GCCGCCGCTT
GCGACGATCT TCGTGACGCC TGCATGA
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| Protein sequence | MNVTSKPGEL VPESDVAAIM RGTHGDPFRV LGMHGGGGAP LSVRVFAPQA AEVAVLGQGG
EVLAPLERIG AEGFFAGTVP GEEKFPYRLR FVSGPHEWEA DDPYRFPEVL GELDEYLLGE
GRHYQLYTRL GAHPAEIEGV QGVSFAVWAP NARRVSVVGA FNAWDGRRHP MRKRIGVGVW
ELFVPGLHTG DLYKYELLGP SGERLPLKSD PLSFAQEAPP ATASVVHGLP EAEWHDAGWM
QERESRQRRD APISIYEVHA GSWRQGLDYD ALAEELSAYV REMGFTHVEF LPISEHPFTG
SWGYQPIGLF APTARFGPPE GFARLVDRLH RDGIGVILDW VPAHFPSDAH GLANFDGTHL
YDHADPRQGF HRDWNTQIYN FGRQEVANFL QASALFWLDR YHVDALRVDA VASMLYLDYS
RNAGEWVPNR HGGRENLEAI DFLRGVNERV RLDHPGCITI AEESTAFPQV SRPVEDGGLG
FGFKWNMGWM HDTLGYFRRD PIHRKHHQND LTFGMVYAYS EDFVLPLSHD EVVHGKGSLI
GQMAGDRWQK FANLRAYFGF MWAHPGKKLL FMGGEFAQER EWNHDASLDW HLLDDPSHAG
MKRLVADLNR EYRKRPALHR MDCDPEGFEW IDAGDSENSV LSFLRKAPGE KPVLAVCNLT
PVVRSDYRIG VPEGGEWREI LNSDAAIYGG SDVGNPGGLQ AEEFSWHGRP ASLRLTLPPL
ATIFVTPA
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