| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2446 |
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| Symbol | |
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| ID | 3720043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1080739 |
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| End bp | 1084047 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070627 |
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| Product | putative trehalose synthase |
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| Protein accession | YP_352508 |
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| Protein GI | 77463004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.500894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGA ATGTCTCTCC CTCCACCGTT GCCGTCCGCC GCACGGACGG CATCGATCGC
AGCCAAACCG ACTGGTACAA GGACGCGATC ATCTATCAGC TGCACATCAA GGCGTTTCAG
GACGCCAATG GCGACGGGAT CGGTGACTTC GCGGGCCTGA TGCAGCGGCT GGATTATGTG
CAGGCGCTGG GCGTGACCGC GATCTGGCTG CTGCCTTTCT ATCCCTCGCC GCTCCGCGAC
GACGGCTACG ACATCTCGGA CTATCGCTCG ATCAACCCGT CCTACGGCGC GATGCGCGAC
TTCAAGCTGT TCGTGCAGGA AGCGCACAAG CGCGGGCTGC GCGTCATCAC CGAGCTGGTC
ATCAACCACA CCTCCGACCA GCATCCCTGG TTCCAGCGGG CCCGGCGGGC GAAGAAGGGA
TCGGCCGCGC GCGACTGGTA CGTCTGGAGC GATACCGACC AGAAATTCCC CGAAACGCGG
ATCATCTTCC TCGATACGGA AAAGTCGAAC TGGACCTGGG ATCCGGTGGC AGGCGCCTAT
TACTGGCACC GCTTCTATTC GCACCAGCCC GACCTGAACT TCGACAATCC CCGTGTGCTC
GAGGAAGTGC TCAAGATCAT GCGCATGTGG CTCGAGATGG GCGTCGACGG GCTCCGGCTC
GACGCGATCC CCTATCTGGT CGAGCGCGAG GGCACCAACA ACGAGAACCT CCCCGAGACG
CACGATGTTC TCAAGAAGAT CCGGGCCAAC CTCGACCAGC ATTTCCCCGA CAGGATGCTG
CTCGCCGAGG CGAACCAGTG GCCGGAGGAC ACGCGCCCCT ATTTCGGCGA GGGCGACGAA
TGCCACATGG GCTTCCATTT CCCGCTGATG CCGCGGATGT ACATGGCGCT GGCGCAGGCC
GACCGGCATC CGATCACCGA CATCATCCGC CAGACGCCCG AGATCCCGGA AGGCTGCCAA
TGGGGCATCT TCCTCCGGAA CCACGACGAG CTGACGCTCG AGATGGTGAC GGCCGAAGAG
CGCGACTACA TGTGGCGCTT CTACGCCGAA GATTCGCGGG CGCGGATCAA TCTCGGCATC
CGGCGCAGGC TGGCGCCGCT GATGAAGAAC GACCGGCGCA AGATCGAGCT TCTGAACCAG
ATGCTGATGT CGATGCCCGG CACGCCCATC GTTTATTACG GCGACGAGAT CGGCATGGGC
GACAACTACT ATCTCGGCGA CCGGGATGGC GTGCGGACGC CCATGCAATG GTCGGCCGAC
CGCAACGGCG GCTTCTCGCG CTGCAATCCG CAGCAGCTCT ACCTGCCGAC GATCCTCGAT
CCGGTCTACG GCCATCAGGC GATCAACGTC GAGGCGCAGG CGGCGGACCC GTCGTCGCTC
CTGAACTGGA CGCGCCGCCT GATCGCGGTG CGCAAGCAGC ATCCGGCCTT CGGGCGCGGC
TCGATGAGCC TGCTCTATCC GCGCAACCGC AAGGTGCTGG CCTATGTCCG CAGCCACGAG
GGCACGGACA TCCTCTGCGT GGCGAACCTC TCGGACACGG CGCAGGCGGT CGAGCTGGAT
CTCGGGCGGT TCCGCGGCGC GGTGCCGGTC GAGCTCACGG GCCGGTCGGA GTTTCCGCCG
GTGGGCGATC TGCCCTACAT GCTGACGCTG CCGCCCTACG GCTTCTACTG GTTCATCCTC
TCCGACCAGC AGGCGCTGCC GAGCTGGCAC CAGCCGATGC CCGAGACGCT GCCGGATTTC
ATCACGCTCA CGACGCGCGA CGGGCGGGCC GAGACGGCGC TCACCGGGCG CGAGACGCGC
CAGCTCGAGG CCGACGTGCT GCCGAACTGG CTGCCGCTGC AACGCTGGTT CGGGGCCAAG
GAGGAGAAGA TCAGCGCGGT GAAACTGGCC GTTCTGGGCT CGCTGTCGGC CGATCATGCC
CTCGTCCGGC TCGAGGCCGA TGTGGGCGGC GAGGTGCAGC AGTATTTCCT GCCCGCCTCC
GCACTCTGGG GCGAGGAGCA GCTCCGGGCC GGGGCGCCCA AGCTGAGCTT CACCCTGGCC
AAGGTCCGGC GCGGGCCGCA GGTGGGCGCG CTCATCGACG GGGCCTATGA CGAGCAGATG
GCGCAGGCGA TGCTCGAGGC GCTGCGCGAC GGTCGCAGAC TGTCTGGTGC CGGGGGCGAG
GTGGTGTTCG AGCCGGGCTC GGGACTGGCC GAGATCGCCG ACCCGGGCGA GCCGCGCTAT
CTCGGGGCCG AGCAGTCGAA CATTTCCATC GCCTTCGGCG ACCGCCTGAT CCTGAAGCTC
TACCGACGCC TGCGGGCCGG CGAGCAGCCG GACGTCGAGG TGGCGCGCTT CCTGACGGAA
GTGGCGGGCT ACACCCATAC GCCCCGCTAT CTCGGCGTCG TGAGCCTGCG CCCGGCGGAG
GGCGAGGCGA CCGTCCTCGC CGCGGCCTTC GCCTTCGTGG CCAACATGGG CGACGCCTGG
CGCGGCCTCT TCGACGCGCT GGTGCGGGAT CTGGGCGAGT TCGGCGGCTG GAGCACGGCC
GAGGCGCCGG AAGTGGAGAA GGACGGCTTC TCCTTCCCGC TCACCATTCC GGGCCTTCTC
GGCCAGCGCA CGGCCGAGCT GCATCAGGCT TTCGCCACCG AGACGGACGA GGCGGCCTTC
CGGATGGAGC CGCTCACGGC CCAGCATCTG ACCGGCTGGG CCGAGGGGGC GCGGCGCGAG
GCCGAGGCCA TGCTGTCGGT GCTCGAACGG CAGCGGACGC ACCTGCCCGA CGAGGTGCTG
CCCCTGGCCG AGGCGCTGCT CGCGCGGCGC GAAGACCTGC TGGCGCGGCT CGACCGCGTT
ACCGGCTTCG AACCCTCGGG CGCGCTGACC CGCATCCATG GCGACTACCA TCTGGGGCAG
GTGCTGCTTG CGCAGGACGA TGTCGCCATC ATCGACTTCG AGGGCGAACC GCGCCGCACG
CTTGCAGAGC GTCGCGAGAA GTCCTCGCCG CTCCGCGACG TGGCGGGGAT GCTGCGTTCG
TTCGACTATG CCGCCGCCGC CGCCCTCGCA CGCCACGAGG AAAGCTTCGG CCCGGCGAGC
GAGCGGGCGG TGGAGCGGGC CGAGGCCTGG CGGCAACAGG CGGTGGCCGA TTTCCTTGCC
GCCTACGAGG GCGCGTCCGC GGGCACCGCG AGCCTGCCCT CCGACCCGGC GCTGAAGGAG
GCGCTGCTCG ATCTCTTCCT CGTGCAGAAG GCGGTCTACG AGACCTCCTA CGAACTGGGC
AGCCGTCCCG CCTGGGTCGG CATCCCGCTG CGCGGGCTTT TGGAACTGCT GGACAGGAAA
CCTGCATGA
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| Protein sequence | MNQNVSPSTV AVRRTDGIDR SQTDWYKDAI IYQLHIKAFQ DANGDGIGDF AGLMQRLDYV
QALGVTAIWL LPFYPSPLRD DGYDISDYRS INPSYGAMRD FKLFVQEAHK RGLRVITELV
INHTSDQHPW FQRARRAKKG SAARDWYVWS DTDQKFPETR IIFLDTEKSN WTWDPVAGAY
YWHRFYSHQP DLNFDNPRVL EEVLKIMRMW LEMGVDGLRL DAIPYLVERE GTNNENLPET
HDVLKKIRAN LDQHFPDRML LAEANQWPED TRPYFGEGDE CHMGFHFPLM PRMYMALAQA
DRHPITDIIR QTPEIPEGCQ WGIFLRNHDE LTLEMVTAEE RDYMWRFYAE DSRARINLGI
RRRLAPLMKN DRRKIELLNQ MLMSMPGTPI VYYGDEIGMG DNYYLGDRDG VRTPMQWSAD
RNGGFSRCNP QQLYLPTILD PVYGHQAINV EAQAADPSSL LNWTRRLIAV RKQHPAFGRG
SMSLLYPRNR KVLAYVRSHE GTDILCVANL SDTAQAVELD LGRFRGAVPV ELTGRSEFPP
VGDLPYMLTL PPYGFYWFIL SDQQALPSWH QPMPETLPDF ITLTTRDGRA ETALTGRETR
QLEADVLPNW LPLQRWFGAK EEKISAVKLA VLGSLSADHA LVRLEADVGG EVQQYFLPAS
ALWGEEQLRA GAPKLSFTLA KVRRGPQVGA LIDGAYDEQM AQAMLEALRD GRRLSGAGGE
VVFEPGSGLA EIADPGEPRY LGAEQSNISI AFGDRLILKL YRRLRAGEQP DVEVARFLTE
VAGYTHTPRY LGVVSLRPAE GEATVLAAAF AFVANMGDAW RGLFDALVRD LGEFGGWSTA
EAPEVEKDGF SFPLTIPGLL GQRTAELHQA FATETDEAAF RMEPLTAQHL TGWAEGARRE
AEAMLSVLER QRTHLPDEVL PLAEALLARR EDLLARLDRV TGFEPSGALT RIHGDYHLGQ
VLLAQDDVAI IDFEGEPRRT LAERREKSSP LRDVAGMLRS FDYAAAAALA RHEESFGPAS
ERAVERAEAW RQQAVADFLA AYEGASAGTA SLPSDPALKE ALLDLFLVQK AVYETSYELG
SRPAWVGIPL RGLLELLDRK PA
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