Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2439 |
Symbol | cheD |
ID | 3720036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1070960 |
End bp | 1071559 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640070620 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_352501 |
Protein GI | 77462997 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.310288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTT GCGACGACAG TCCTTCAGCC AGCCAGATAA GCATCACGCA TGTGACCCAA GGAAGCTGTG TTGCCTCCTC ATCCCCGAAC GAGGTCTATG CGACGATCCT TGGGTCCTGC ATCTGCACCT GCATGTGCGA TCCGGTGGCC GGCGTGGGGG GGATGAACCA CTTCCTGTTG CCTTCAGCCG ACGTCGAAGA TGCCCAGCAC CTCCGTTACG GCTCCCATGC AATGGAACTG CTGATCAATG CGCTTCTCAA GCTGGGCGCC GCCCGGCAGC GGATAGAAGC CAAGATCTTC GGCGGCGCAA TGATGACGCC GCAGCTGGGG GCGATCGGTC AAGCAAATGC TGCTTTCGCC CGGCGCTATC TCAAAGATGA GGGGATCCGC TGCACGGCTC ACAGTCTGGG GGGCAATCGG GCCAGGCGCA TCCGGTTCTG GCCCAAGACG GGGCGCGTCC AGCAGATGTT CTTGGGCAGC GAGGATGTGG TGCCGAACGA ACAACCGCAA TTCCGCCTTC AGGGTGGCGC CGGCGACGTC ACCTTCTTCG ACCGACATAA CAACGCCGAA ATGCCCGATC CGATCAAGGA ACCGAGATGA
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Protein sequence | MTRCDDSPSA SQISITHVTQ GSCVASSSPN EVYATILGSC ICTCMCDPVA GVGGMNHFLL PSADVEDAQH LRYGSHAMEL LINALLKLGA ARQRIEAKIF GGAMMTPQLG AIGQANAAFA RRYLKDEGIR CTAHSLGGNR ARRIRFWPKT GRVQQMFLGS EDVVPNEQPQ FRLQGGAGDV TFFDRHNNAE MPDPIKEPR
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