| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2420 |
|---|
| Symbol | |
|---|
| ID | 3720015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1049765 |
|---|
| End bp | 1050490 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640070599 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_352480 |
|---|
| Protein GI | 77462976 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3484] Predicted proteasome-type protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.546429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATT GCGTGGGCCT GCTGCTCAAC GAGGGAATGG TGCTCCTGTC GGACACCCGC
ACGAACGCGG GCTTCGACAA TATCGCCATC TACAAGAAGA TGTTCACCTT CGAGGAGCCC
GGCGAGCGCA TCGTGGCGAT CCTGACGGCG GGCAGCCTCT CGGTCACGCA GACCACCATC
GCCCGGCTGA AGGAGGCGAT CCACGATCCC GACGCGACCG AGGAAAGCTC GATCCTGAAG
GCGCCCACCA TGCTCATGGT GGCCGAGATC ATCGGCAACA TGCTGGCGCA GGTGCGGCTC
GACATCGACG AGAAGCTGTC GGCGATGAAG CAGAGCGCGT CGGCCAGCAT GATCGTCGCG
GGCCAGCGCC GGGGCGGCGA GATGCGGATG TTCCTCATCT ACCCCGAGGG CAACTTCATC
GAGGCGACCG AGGACACGCC CTTCCTGCAG ATCGGCGAGC ACAAATACGG CAAGCCGATC
CTCGACCGGG TGGTGAAGCC CGAGACCTCG CTGGCCGACG CGCAGAAGGC CGTGCTCCTG
TCGATGGATT CGACCCTGCG CTCGAACCTG TCGGTGGGAA TGCCGCTCGA CCTTGCGGTG
ATCGAGCGGG ACGGCTGCTG CATCGCCTCG CGCCGCCGGA TCGAGGCGGG AGACGAGAAT
TTCCGCGCCA TGTCCGAGGC CTGGTCGCGC GCGCTGCGCG AGGGTTTCTC GCAGATCAGG
ATCTGA
|
|---|
| Protein sequence | MTYCVGLLLN EGMVLLSDTR TNAGFDNIAI YKKMFTFEEP GERIVAILTA GSLSVTQTTI
ARLKEAIHDP DATEESSILK APTMLMVAEI IGNMLAQVRL DIDEKLSAMK QSASASMIVA
GQRRGGEMRM FLIYPEGNFI EATEDTPFLQ IGEHKYGKPI LDRVVKPETS LADAQKAVLL
SMDSTLRSNL SVGMPLDLAV IERDGCCIAS RRRIEAGDEN FRAMSEAWSR ALREGFSQIR
I
|
|---|
| |