| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2409 |
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| Symbol | rluD |
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| ID | 3720006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1038091 |
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| End bp | 1039140 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640070590 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_352471 |
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| Protein GI | 77462967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCC TTCCGCCCCA CGGGGGCAAA CTGAGCATCA CGATCGGAGA GGATCCTCCC
GACCGTCTTG ATAAGGCGCT CGTGCGCGAG GCGCCAGAGG AGGCCGCGCT GTCGCGCTCG
CGGCTGATGA AGCTGATTGG CGAGGGCGCG GTGCGGCTCG AGGGCGCGCC CGTGACGGAT
CCGAAGGCGA AGGTCGCCGA GGGGCAGGTC TACGAGATCG CGCTCGATGC GCCGGCCGAG
GTGGAGGCCC GCCCCGAGGC GATCCCGCTC TCGGTCGTGT GGGAGGACGA AGACCTCATC
GTCATCGACA AGCCGGTGGG GATGGTGGTC CATCCCGCGC CCGGTCAGTG GACGGGGACG
CTGGTCAATG CGCTTCTCCA CCATTGCGGC GAGAGCCTCT CGGGCATCGG CGGGGAGAAG
CGCCCCGGCA TCGTCCACCG GATCGACAAG GACACGTCGG GGCTTCTCGT GGTGGCCAAG
ACCGACCGCG CGCATCAGGG CCTTGCGGCG CAGTTCGAGG CGCATACGGT CGAGCGGCGC
TATCTCGCGC TGGTGCATGG CGTGCCCGAG GTCTCGGACC CGCGGCTGCG CGGCGTGCGC
GGCACGAGCT TCGAGCCGGG CGGCGTGCTG CGGATCGCCA CCGGCCTCGC CCGCCACCGC
ACCGACCGGC AACGGCAGGC GGTCACCTTC GAGGGCGGGC GTCATGCCGT GACCCGGGCG
CGGCTGCTCG AGCGGTTCGG CATGCCGTCG GTGCTGGCGC TCGTCGAATG CCGGCTCGAG
ACGGGGCGCA CGCACCAGAT CCGGGTGCAT ATGGCCCATG CGGGCCACGG GCTGATCGGC
GACCAGACCT ATGGCGGCAG GCGCAAGCTC TCGCCGAAGG CACTGGGGGC CGAGGCCGCG
GCGGCGGCGG AAGCCTTCCC CCGGCAGGCG CTCCATGCGG CGAGCCTCGG CTTCCGCCAT
CCGGTGAGCG GCGAGGAGCT GAGCTTCGAG AGCCCCTTGC CCGCGGATAT GGCGAGCCTC
CTGTCTCTCC TGCCGCGGAT GCAAGGGTAA
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| Protein sequence | MAILPPHGGK LSITIGEDPP DRLDKALVRE APEEAALSRS RLMKLIGEGA VRLEGAPVTD
PKAKVAEGQV YEIALDAPAE VEARPEAIPL SVVWEDEDLI VIDKPVGMVV HPAPGQWTGT
LVNALLHHCG ESLSGIGGEK RPGIVHRIDK DTSGLLVVAK TDRAHQGLAA QFEAHTVERR
YLALVHGVPE VSDPRLRGVR GTSFEPGGVL RIATGLARHR TDRQRQAVTF EGGRHAVTRA
RLLERFGMPS VLALVECRLE TGRTHQIRVH MAHAGHGLIG DQTYGGRRKL SPKALGAEAA
AAAEAFPRQA LHAASLGFRH PVSGEELSFE SPLPADMASL LSLLPRMQG
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