| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2407 |
|---|
| Symbol | |
|---|
| ID | 3720004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1035995 |
|---|
| End bp | 1037728 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640070588 |
|---|
| Product | periplasmic sensor hybrid histidine kinase |
|---|
| Protein accession | YP_352469 |
|---|
| Protein GI | 77462965 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.433609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCATGC GCCCGCCCTG GCTCGCCCCC CTTCCGCCCG CGGCCCTCCA GCAGGAGGTC
GCCCGTCAGG CCGCGATCCT GCGGCGCGAG GCCTTCGTGC GCTTCCCCGC CATGGCGCTG
GCCTTCGCCG TCTCGATGCT CTTCCTGCCG GGCTGGATCG TCTGGACCTG CGTCCTGCTC
TCGGCCCTGG GCGAGATCGT CACGAACCAC CTCGACGCCT GCCCGGCGCG GATCACCGAA
AGGTGGCGCC ACCCCGCCTA CATCCTCTCC GCCTTCCTGC TCCAGTGCGC CTTCGTGACG
CCGCCCGCGC TGATGTGGCA TCTCGAGAAC CCCTATGTGA AGGCCTTCGC CATCGGGTTC
ATGGTCTGCT CGATGATGCA TGTGGCGACG GTGCGGTCGA TCCACCTGCC GATGGGACTG
GCGGGCGGCA GCGCCATCGC GCTCTTCACG CTGGCCTCGA ACACGCTCTA CTGGCTGCCG
CGGCACGATC TTGCGGCGCT GGGGCTCACC ACCCTCTGCG CGCTGGTGGC GCTGGCCTAT
TCGCTGGCGG CCATCCTCAT GACCTACCGG CTGCATCGCG AGGCGGCCGC CGGGCGGGCC
GAGGCGCTCG CGGCCAATGC GACGAAGGAC CGGTTCCTCG CGCAGATGAG CCACGAGCTG
CGCACGCCCC TCAATGCGAT CCTCGGCATC GGCCATGCCG AACTGCGGGG CGCGTCCGAT
CCGGTCAGCC GCGACCGTCT GGGCGTGCTG ATCCGCTCGG CCGAGGGGCT TTCGACGATG
CTCGACGACA TCCTCGACAT GTCGGCGGTC CAGCAGGGCC GGATGCCGGT GCGGCCGCAG
ACCGTCTCGC CGCGCGAGGA GATCGTGGCC AGCGTCGAGC TGTTCCGCCC TCTGGTCGAG
GAGACGGGCG TGGCGCTCGA GCTCGTGCTG GGCGATCTGC CGAAGCGCGC GCGGCTCGAT
CCGCAGCGCC TGCGCCAGTG CCTGTCGAAC CTCCTGTCGA ACGCGCTGAA GCACACGCAG
GAGGGCCGCA TCCGGGTCGA GGCCCGGATC GAGGGCGCGG GGCCGCGCCC GCTTCTCCGC
ATCGAGGTGA GCGACACGGG CGACGGGATC CTTCGGGAAG AGGCGGAAGC CATCTTCGAT
CCGTTCATGC CCACGGGCAA CGGGCGCCTT GCGGGCAACG GGCTCGGCCT CTCGATCAGC
CGGGCGCTCG CGCGGCAGAT GGGCGGCGAT CTGCGGCTTC TGGCGCAGCC GGGGCCGGGC
GCGCGGTTCG CGCTGACCAT CGCGCTCCAG ACCGTCGAGG CGCCCGCCTC CGCGCCCGCC
GCACCGCGGG CCGAACACCG GCTCGGCGGA CGGCGCGTCC TCGTGGTCGA TGACATATCC
ACGAACCGGC TGGTCGCGGC CGCCTATCTC CAGCTCTTCG GCGTCCGCAC GATCGAGGCC
CAGAGCGGGC CCGAGGCGCT GGCCCTCCTC GAACGCGAGC CGGTGGATCT GGTGCTGCTC
GACATGAACA TGCCCGGCAT GGACGGGCTC GAGACCCTGC GGCGGATCCG GGCGATGCCC
GGCCCCGCGG CGAGCCTGCC GGTCGTGGCC ATGACCGCCG ATGCGACCGA GGAACAGCGC
GACATGTATC TCGGCGCGGG CCTCACCGGC TATGTGGCCA AGCCCGTCAC CCCCGACCGG
ATGTCGGCCG AACTCAGCCG CGTGCTGGGA CTCGCGCATC CCGACGAGAG CTGA
|
|---|
| Protein sequence | MPMRPPWLAP LPPAALQQEV ARQAAILRRE AFVRFPAMAL AFAVSMLFLP GWIVWTCVLL
SALGEIVTNH LDACPARITE RWRHPAYILS AFLLQCAFVT PPALMWHLEN PYVKAFAIGF
MVCSMMHVAT VRSIHLPMGL AGGSAIALFT LASNTLYWLP RHDLAALGLT TLCALVALAY
SLAAILMTYR LHREAAAGRA EALAANATKD RFLAQMSHEL RTPLNAILGI GHAELRGASD
PVSRDRLGVL IRSAEGLSTM LDDILDMSAV QQGRMPVRPQ TVSPREEIVA SVELFRPLVE
ETGVALELVL GDLPKRARLD PQRLRQCLSN LLSNALKHTQ EGRIRVEARI EGAGPRPLLR
IEVSDTGDGI LREEAEAIFD PFMPTGNGRL AGNGLGLSIS RALARQMGGD LRLLAQPGPG
ARFALTIALQ TVEAPASAPA APRAEHRLGG RRVLVVDDIS TNRLVAAAYL QLFGVRTIEA
QSGPEALALL EREPVDLVLL DMNMPGMDGL ETLRRIRAMP GPAASLPVVA MTADATEEQR
DMYLGAGLTG YVAKPVTPDR MSAELSRVLG LAHPDES
|
|---|
| |