Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2399 |
Symbol | |
ID | 3719996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1026870 |
End bp | 1027763 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640070580 |
Product | ABC putrescine transporter, inner membrane subunit |
Protein accession | YP_352461 |
Protein GI | 77462957 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGCAA AGACCAAGCG CGCGCGGACG GGCTGGCTTC TGTCGGCCCC GGCCCTCGTG ATCCTCCTCC TTGCCGCGTC GGGGCCGCTG CTGGTGGTGC TGGTCTACAG CTTTCTCGTG AAGGGCCAGT ATGGCGGCGT GATCTGGACC TTCTCGACCG AGGCCTGGTT CGAGGTGCTC TTCACCCGCG ACATCTTCTC GGACGAAGTG ACGCTCGCCG ACGCCCACCT CGCGATCTTC TGGCGCTCGG TGAAACTGTC CCTGATGACG ACGGCCATCA CCTTCGCCGT GGGCTTTCCC ACCGCCTGGT TCATCGCGAC CCGGCCGCCG AACCGGCGGG CGCTCTGGCT CTTCCTCATC ACCATCCCGT TCTGGACCAA CCTGCTGATC CGCACCTTCG CCATCAACGA GGTGATCCGC AACGAGGGCA TCCTGAACAC GCTGATGATC CGTGCGGGCC TGATCGAGCG GCCGATCCAG ATCCTCTATA CCGACACGGC GGTGCTGATC GGGATGGCCT ATGTCTACCT GCCGCTCATG GTGCTGCCGC TCTTCGCCGC GATCGACCGG TTCGACATGC GACTGCTCGA GGCGGCTTAC GACCTCTATG CGAGCCGCTG GCAGGTGCTG CGGCGGATCA TCCTGCCGCT GGTGAAGCCC GGGATCGTCG CGGGCTCGAT CCTCGTCTTC GTCCCCTCGC TCGGCGCCTA TGTCACGCCG CGGGTGCTGG GCGGCGGCAA GAACATGATG ATCGGCAATT TCATCGAGCT GCAGTTCGGA CAGGGCCGCA ACTGGCCGCT CGGCGCCGCG CTCTCGATGC TGCTTCTGGC CATCGTGATG GTGGCGCTTC TGGTCTATGT CCGCGCCGCG GGCCGGGGGA CCGGCCATGG GTAA
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Protein sequence | MGAKTKRART GWLLSAPALV ILLLAASGPL LVVLVYSFLV KGQYGGVIWT FSTEAWFEVL FTRDIFSDEV TLADAHLAIF WRSVKLSLMT TAITFAVGFP TAWFIATRPP NRRALWLFLI TIPFWTNLLI RTFAINEVIR NEGILNTLMI RAGLIERPIQ ILYTDTAVLI GMAYVYLPLM VLPLFAAIDR FDMRLLEAAY DLYASRWQVL RRIILPLVKP GIVAGSILVF VPSLGAYVTP RVLGGGKNMM IGNFIELQFG QGRNWPLGAA LSMLLLAIVM VALLVYVRAA GRGTGHG
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