Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2346 |
Symbol | |
ID | 3719879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 971386 |
End bp | 971928 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640070521 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_352403 |
Protein GI | 77462899 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAAG ACGAAAAGGC CCTGCAGCTT GTGCATGGCC GCGTGAAATG GTTCGATCCG GCCAAGGGCT TCGGGTTCAT TGTGACCGAG GAGAATGGGG CCGACATCCT GCTCCATGCC AATGTCCTGC GGAATTACGG CCAGAGTTCG GTGGCGGACG GCGCCGGCAT CACCGTCAAG GTCCAGAGCA CCCAGCGCGG CGTTCAGGCT GTCGAAGTGA TCGAGATCGA GCCTCCGGAA GGAACGACCT TCCACCTCAG CGAGGACAGC GAAGCGACGA CCCCCGAGGA GATCGCCGCG CGTCCGCTGG AGCCCGGCCG GGTGAAATGG TTCGACAAGG GCAAGGGCTT CGGCTTCGCC AATGTCTTCG GCCGGCCCGA GGATGTCTTC ATTCATGTCG AGGTCCTGCG GATGTCCGGC TTTGCCGACC TTGCGGCAGG CGAGGCGGTG GCGCTGCGCA TCATCGAGGG GCGGCGCGGG CGCATGGCGG TGCAGGTGGT CTCATGGGAA GTCGCAGCGC GTCAGCATCA GCAACCGGCC TGA
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Protein sequence | MVEDEKALQL VHGRVKWFDP AKGFGFIVTE ENGADILLHA NVLRNYGQSS VADGAGITVK VQSTQRGVQA VEVIEIEPPE GTTFHLSEDS EATTPEEIAA RPLEPGRVKW FDKGKGFGFA NVFGRPEDVF IHVEVLRMSG FADLAAGEAV ALRIIEGRRG RMAVQVVSWE VAARQHQQPA
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