| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2333 |
|---|
| Symbol | nadE |
|---|
| ID | 3719865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 959907 |
|---|
| End bp | 961571 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640070507 |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_352389 |
|---|
| Protein GI | 77462885 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC GCTTCCGCCT GACCCTCGCG CAGCTCAATC CGACGGTGGG CGATCTTGCC
GGAAATGCGG CGCTGGCCCG CCGGGCGTGG GACGAGGCGC GCGCCGCCGG GTCGGACATG
CTGGCCCTGA CCGAGATGTT CGTGACGGGC TATCAGACGC AGGATCTGGT GCTGCGGCGG
GCCTTCGTCG AGGAGGCGAT GGCCACGATC GAGCGGCTGG CCGCCGACTG CGCCGAGGGG
CCGGCCATCG GCATCGGCGG GCCCTGCCTC GAGGACGGGC GGCTGATGAA TGCCTACTGG
GTGCTGGAGG GCGGCCGGGT CAGCGCCCGC GTGTTCAAGC ACCATCTGCC CAATGCCGAA
GTGTTCGACG AGAAGCGGGT CTTCTCGTCC GGCGAGGTGC ACGGGCCCTG CCGGGTGGGG
CCCTTGCGCA TCGGCATTCC GATCTGCGAG GACAGCTGGC ACCCGGATGT CTGCGAGACG
CTGGCCGAGA CCGGGGCCGA GATCCTTCTG GTGCCGAACG GCTCGCCCTA TCACCGCGAG
AAGCTGGATG TGCGGGTGAA CCTGATGGTC ACGCGGGTGG TCGAGACCGG GCTGCCGCTC
GTCTATCTCA ACATGGTGGG CGGGCAGGAC GATCAGGTGT TCGACGGCGC CTCCTTCGTG
CTCAATCCGC ACGGGCGGCT GATGGCCCAG CTTCCGGCCT TCGAGGAGGC GCTCGTCCAT
GTCGATTTCG AGGCGGCGGA CGAGGGCTGG CGGGCGCTGC CCGCGCCCAT CGTGGCCCAG
CCCGACCTCT GGGAGGCCGA CTATCACGCG ATGGTGCTGT CGCTGCGCGA TTATCTGGGC
AAGAGCGGCT TTTCGCGCGT GCTTCTGGGG CTGTCGGGCG GGATCGATTC CGCTCTGGTT
GCAGCCATCG CCGCCGATGC GCTGGGCCCC GAGGCCGTGC GCTGCGTGAT GCTGCCCTCG
CGCTTCACCT CGCAGGCCTC GCTCGAGGAT GCCGCGGCGG TGGCCCGCGC CCTCGGCTGC
CGTCTGGACG AGGTGGGGAT CGGGGGGCCG CAGGAGGCGG TGGGGGCGGC GCTCGGGCCG
CTCTTCGAAG GCACCGAGCC CGGCATCACC GAGGAGAACA TCCAGAGCCG CCTGCGGGGC
CTTCTGCTCA TGGCGCTGTC GAACAAGTTC GGCGAGATGC TCCTGACCAC CGGCAACAAG
TCCGAGGTGG CGGTGGGCTA CTGCACGATC TACGGCGACA TGAACGGGGG CTACAATCCG
ATCAAGGATC TCTACAAGAC CCGGGTGTTC CAGATGTGCC GCTGGCGCAA CGGCCACCAC
CGCCCCTGGA TGAAGGGGCC CGAGGGCGAG GTGATCCCGC CGCGGGTGAT CGACAAGCCG
CCCTCGGCCG AGCTGCGCGA GGACCAGAAG GATGAGGACA GCCTGCCGCC CTATGCCACG
CTCGACGCGA TCCTCGAAGG GCTCGTGGAC CGCGAGGAGG GTGTGGCCGA GCTGGTGGCG
CGGGGCTTCG AGCGCGAGAC GGTGGCGCGG ATCGAGCGGC TGATCCTCGG CAGCGAATGG
AAGCGCTTCC AGTCGGCGCC GGGGACGCGG CTCACGCGGC GGGCCTTCTG GCTCGACCGG
CGCTATCCGA TGGTGAACCG CTGGCGGGAT GCGGGCGGCG CCTGA
|
|---|
| Protein sequence | MTERFRLTLA QLNPTVGDLA GNAALARRAW DEARAAGSDM LALTEMFVTG YQTQDLVLRR
AFVEEAMATI ERLAADCAEG PAIGIGGPCL EDGRLMNAYW VLEGGRVSAR VFKHHLPNAE
VFDEKRVFSS GEVHGPCRVG PLRIGIPICE DSWHPDVCET LAETGAEILL VPNGSPYHRE
KLDVRVNLMV TRVVETGLPL VYLNMVGGQD DQVFDGASFV LNPHGRLMAQ LPAFEEALVH
VDFEAADEGW RALPAPIVAQ PDLWEADYHA MVLSLRDYLG KSGFSRVLLG LSGGIDSALV
AAIAADALGP EAVRCVMLPS RFTSQASLED AAAVARALGC RLDEVGIGGP QEAVGAALGP
LFEGTEPGIT EENIQSRLRG LLLMALSNKF GEMLLTTGNK SEVAVGYCTI YGDMNGGYNP
IKDLYKTRVF QMCRWRNGHH RPWMKGPEGE VIPPRVIDKP PSAELREDQK DEDSLPPYAT
LDAILEGLVD REEGVAELVA RGFERETVAR IERLILGSEW KRFQSAPGTR LTRRAFWLDR
RYPMVNRWRD AGGA
|
|---|
| |