| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2313 |
|---|
| Symbol | |
|---|
| ID | 3719844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 935222 |
|---|
| End bp | 936208 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640070486 |
|---|
| Product | 2-hydroxyacid dehydrogenase |
|---|
| Protein accession | YP_352368 |
|---|
| Protein GI | 77462864 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.48395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGGG AACGCCTCAC TGTTGTCGTC ACGCGACGCC TGCCGGACGT GGTCGAGGCC
CGCATGAAGG AGCTGTTCCG GGTCGAGCTC CGCGACCCCG ATACCCAGAT GTCGCGCGAG
GATCTGATCG AGGCGATGGG GCGTGCGGAC GTGCTGGTGC CGTGCCTGAC CGACGACATC
GACGCCAACA TGCTGGCACA GGCCGGGCCC AGGCTGAAGC TGATCGCGAA CTACGGCGCG
GGCGTGGATC ACATCGACGT GGCCTCGGCG CGCCAGCGCG GCATCCTCGT GTCGAACACC
CCCGATGTCG TGACCGAGGA CACGGCGGAC ATGGCCCTCG CCCTGATCCT TGCGGTCACC
CGCCGCATTC CGGAGGGCTT GACCGAGATG CAATCGGGCG ACTGGCCCGG CTGGTCGCCG
ATGGCGCATC TGGGCGGGCG GCTCCGCGGC CGGCGGCTCG GCATTCTCGG AATGGGCCGG
ATCGGGCAGG CGGTCGCGCG GCGCGCCCAC GCCTTCGGGA TGCAGATCCA CTACCACAAC
CGCAAGCGCC TGCGCCCCGA GATCGAGGCC GAGGTCGGCG CGACCTTCTG GGAGAGCCTC
GATCAGATGG TGACGCGCAT GGACATCATC TCGGTCAATT GCCCGCACAC GCCCTCGACC
TTCCACCTGC TGAACGCGCG GCGGCTGAAG CTGCTGAAGC CCACGGCGGT GATCGTGAAC
ACCTCGCGCG GCGAGGTGAT CGACGAGAAT GCCCTGACGC GCGGGCTGCG CGCGGGCGAG
ATCGCGGGCG CGGGTCTCGA CGTGTTCGAG CACGGCCACG AGATCAATCC CCGCCTGCGC
GAGCTGCCGA ACGTCGTCCT CCTGCCGCAC ATGGGCTCGG CCACGCTCGA GGGCCGCATC
GAGATGGGCG AGAAGGTCAT CCTGAACATC AAGACCTTCG CCGACGGCCA CCGCCCGCCG
GATCAGGTGC TGCCCTCGAT GCTCTGA
|
|---|
| Protein sequence | MPGERLTVVV TRRLPDVVEA RMKELFRVEL RDPDTQMSRE DLIEAMGRAD VLVPCLTDDI
DANMLAQAGP RLKLIANYGA GVDHIDVASA RQRGILVSNT PDVVTEDTAD MALALILAVT
RRIPEGLTEM QSGDWPGWSP MAHLGGRLRG RRLGILGMGR IGQAVARRAH AFGMQIHYHN
RKRLRPEIEA EVGATFWESL DQMVTRMDII SVNCPHTPST FHLLNARRLK LLKPTAVIVN
TSRGEVIDEN ALTRGLRAGE IAGAGLDVFE HGHEINPRLR ELPNVVLLPH MGSATLEGRI
EMGEKVILNI KTFADGHRPP DQVLPSML
|
|---|
| |