| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2299 |
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| Symbol | atpD |
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| ID | 3719830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 922141 |
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| End bp | 923568 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640070472 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_352354 |
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| Protein GI | 77462850 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0962572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAG CATCCCAAGG CAAGGTGACG CAGGTCATCG GCGCCGTGGT GGACGTGCAG
TTCGACGGTG GCCTGCCGCC CATCCTGAAC GCGCTCGAAA CCGAGAACAA CGGCAAGCGT
CTGGTCCTCG AAGTGGCCCA GCACCTCGGC GAGAGCACCG TCCGCACGAT CGCCATGGAC
GCGACGGAAG GTCTGGTGCG CGGCGCCCGG GTGACGGACA CCGGCAGCCC GATCTCGGTG
CCGGTGGGTG ACGCCACCCT CGGCCGCATC CTGAACGTGA TCGGCGAGCC GATCGACGAG
AAGGGCGACC TCGGCGAGGC CTCGACCCGC GCGATCCACC AGCCGGCCCC GACCTTCGCC
GAGCAGTCGA CCACCTCGGA GATCCTCGTC ACCGGCATCA AGGTGATCGA CCTTCTCGCG
CCCTACTCGA AGGGCGGCAA GATCGGCCTC TTCGGCGGCG CCGGCGTGGG CAAGACCGTT
CTCATCATGG AGCTCATCAA CAACATCGCC AAGGTGCACT CGGGCTACTC CGTGTTCGCC
GGCGTGGGTG AGCGGACCCG TGAAGGGAAC GACCTCTACC ACGAGATGAT CGAATCCGGG
GTTATCAAGA TCGACAACCT CTCGGAGTCG AAAGTGGCGC TGGTCTACGG CCAGATGAAC
GAGCCTCCGG GGGCGCGTGC CCGCGTGGCG CTGACCGGCC TCACGCTCGC CGAGCAGTTC
CGCGACCAGT CGGGGACGGA CGTGCTGTTC TTCGTGGACA ACATCTTCCG CTTCACCCAA
GCGGGTTCGG AAGTGTCGGC GCTTCTCGGC CGTATTCCTT CGGCCGTGGG CTACCAGCCG
ACGCTCGCCA CCGACATGGG CGCCCTGCAG GAGCGCATCA CCTCGACGAA AGCCGGCTCG
ATCACCTCGG TGCAGGCGAT CTACGTTCCG GCCGACGACC TTACCGACCC GGCGCCGGCC
ACCTCCTTCG CCCACCTCGA CGCCACGACC GTGCTCTCGC GCGCGATCTC GGAACTCGGG
ATCTACCCGG CCGTGGACCC GCTCGACTCC ACCTCGCGGA TCCTCGATCC GCAGATCGTC
GGCGAAGAGC ACTACAACGT GGCCCGTGCG GTGCAGGGGA TCCTTCAGCG CTACAAGTCG
CTGCAGGACA TCATCGCCAT CCTCGGCATG GACGAACTGT CGGAAGAGGA CAAGCTGTCC
GTGGCCCGCG CCCGGAAGAT CCAGCGCTTC CTGAGCCAGC CGTTCGACGT GGCGAAGGTC
TTCACCGGGT CGGACGGGGT GCAGGTCCCG CTCGAGAAAA CCATTGCCTC CTTCAAGGCG
GTGGTGAACG GCGAGTATGA CCACCTGCCG GAAGCCGCCT TCTACATGGT CGGCGACATC
GAGGATGTGA TCGCCAAGGC CCAGCGTCTC GCGGCGCAGG CGGCGTAA
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| Protein sequence | MATASQGKVT QVIGAVVDVQ FDGGLPPILN ALETENNGKR LVLEVAQHLG ESTVRTIAMD
ATEGLVRGAR VTDTGSPISV PVGDATLGRI LNVIGEPIDE KGDLGEASTR AIHQPAPTFA
EQSTTSEILV TGIKVIDLLA PYSKGGKIGL FGGAGVGKTV LIMELINNIA KVHSGYSVFA
GVGERTREGN DLYHEMIESG VIKIDNLSES KVALVYGQMN EPPGARARVA LTGLTLAEQF
RDQSGTDVLF FVDNIFRFTQ AGSEVSALLG RIPSAVGYQP TLATDMGALQ ERITSTKAGS
ITSVQAIYVP ADDLTDPAPA TSFAHLDATT VLSRAISELG IYPAVDPLDS TSRILDPQIV
GEEHYNVARA VQGILQRYKS LQDIIAILGM DELSEEDKLS VARARKIQRF LSQPFDVAKV
FTGSDGVQVP LEKTIASFKA VVNGEYDHLP EAAFYMVGDI EDVIAKAQRL AAQAA
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