| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2226 |
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| Symbol | glgX |
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| ID | 3719756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 840316 |
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| End bp | 842400 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640070399 |
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| Product | glycosidase |
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| Protein accession | YP_352283 |
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| Protein GI | 77462779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCC CGACCCGCCC GGCCCCGCCG CTCAAGTTCG ACATGTCCTC GGCCCATCCC
AACCGGCTCG GGGCGGATTT CGACGGCGAG GGCACCAATT TCCCCCTTTT CTCCGAGAAT
GCCACGCGGG TCGAGCTCTG CCTCTTCGAC GAGACCGGCC AGACCCAGAC CCACTGCCTC
GATCTGCCCT CCTACGAGGG CGGGATCTGG TACGGCTACC TGCCCGGCAT CCGCGAAGGA
CAGACCTACG GCTACCGTGT CCACGGCCCC CATGCGCCCG AAGAGGGCCA TCGCTTCAAC
CCGAACAAGC TGCTGATCGA CCCCTATGCC CGCGAACTGC GCGGGGACCT GATCTGGGAC
GATGCGCTCT TCGGCTATCC GATCGGCGGC GACGATCTCG AACTCGATCC GCGCGACAGC
GCACCCTTCA TGCCGAAGGC GGTGGTGGTC GATCCGGCCT TCGACTGGGA GGCGGACAAG
GCGCTCCGGC ACCGCTGGCA GGACACCGTG ATCTACGAGG CCCATGTGAA GGGTCTGACC
ATGCGCCATC CGGGCGTGCC GGAAGAGGAT CGCGGCACCT TCAAGGGCCT CGCCTCGCCG
GCGGTGATCG ACCATCTGAA GGCCATCGGG GTCACGGCGA TCGAGCTTCT GCCCATCCAC
GGCTTCCTCA ACGACCGCCA CCTGATCGAG AAGGGCCTGT CGAACTACTG GGGCTACAAC
ACGCTCTCCT TCTTCGCGCC CTATCGGCCC TACACGAAGT CGGGCTCCAT GCGCGAGGTG
AAGCGGGCGA TCAAGCGGTT CCACGATGCC GGCATCGAGG TGATCCTCGA TGTGGTCTAC
AACCACACCT GCGAGGGCAA CGAGAAGGGC CCGACGCTCT CGTTCCGCGG CATCGACAAT
GCCTCCTACT ACCTGCTCTC GCCCGAGGCG AAGCGCCATT CCTTCGACAC GACTGGCACC
GGCAACACGC TCAACGTGGC CCATCCGATG GTGCTGCGCA TGGTGATGGA CTCCTTGCGC
TACTGGGTCG AAGTCATGCA TGTCGACGGC TTCCGCTTCG ACCTCGCCTC GACACTCGGC
CGCGAGCCCG AGGGGTTCGA ACGCGGCGGC ACGTTCTTCG CGGCGATCCG GCAGGATCCG
GTGCTCTCGA TGGTCAAGCT GATCGCCGAA CCCTGGGACA TCGGCGAGGG CGGCTATCAG
GTCGGCGGCT TCCCCTGGCC GTTCCGCGAA TGGAACGACA AGGCGCGCGA CGACCTCCGC
GCCTTCTGGC GGCGCGACCC CGGGCTGATC GGCGACGTGT CGCAGCGTCT TCTGGGCTCG
CCGGTGCAGT TCTCCCATTC GCACCGGCCT GCGACCTCGT CGGTCAACTT CATCGCGGCC
CATGACGGCT TCACCGCCTG GGACCTCGTC TCCTACGACG AGAAGCACAA TGAGGCGAAC
GGCGAGGACA ACCGCGACGG CCATTCGCAC AACCTGTCGC ACAATCTGGG CGCCGAGGGG
CCGACCGACG ATCCCGGCAT CCTCGAGGCG CGGCTGCGGC GGGTGAAGGC CATGCTCGCC
ACGCTGTTCC TGTCGCAGGG CGTGCCCATG ATCCTCGCGG GCGACGAGTT CGGCCAGAGC
CAGCAGGGCA ACAACAACGC CTACTGCCAG GACAATGAGA TCGCCTGGCT CGACTGGGAG
GAGGCGCGCG ACGAGTTGAT CCGCGCCGTG GCGGACCTCG CCGAGTTCCG CAAGGCCGAC
GGCGGCATAT CGCGTGCCCG CTTCGCCGTG GGCCCGGACG CGGTGCAGCA CGACACGCCG
GTGGCTACGT GGCTCCATCC TGCCGGGCGC GAGATGGAGG AGGGCGACTG GAACGAGGGC
GAGCTCAGGC TCTTCGCGCT CCGGCTCGAC CTCCCGCGCG GGCGCGACCT CCTCGTGGTG
CTGAACGCGG GCGACGACGG CGACTTCGCG CTGCCCGAGG GCGAGTGGCG GCTGAAGATC
GACACGTCGC GCGAGCGCAT CGCCTGCGAC GAGCCCGCTC TGGGCACCCT CCCGGTCGGC
TGGCAGAGCG TGATGGTGCT GGTGGCCGCC GAAGAGGCCG ACTGA
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| Protein sequence | MKRPTRPAPP LKFDMSSAHP NRLGADFDGE GTNFPLFSEN ATRVELCLFD ETGQTQTHCL
DLPSYEGGIW YGYLPGIREG QTYGYRVHGP HAPEEGHRFN PNKLLIDPYA RELRGDLIWD
DALFGYPIGG DDLELDPRDS APFMPKAVVV DPAFDWEADK ALRHRWQDTV IYEAHVKGLT
MRHPGVPEED RGTFKGLASP AVIDHLKAIG VTAIELLPIH GFLNDRHLIE KGLSNYWGYN
TLSFFAPYRP YTKSGSMREV KRAIKRFHDA GIEVILDVVY NHTCEGNEKG PTLSFRGIDN
ASYYLLSPEA KRHSFDTTGT GNTLNVAHPM VLRMVMDSLR YWVEVMHVDG FRFDLASTLG
REPEGFERGG TFFAAIRQDP VLSMVKLIAE PWDIGEGGYQ VGGFPWPFRE WNDKARDDLR
AFWRRDPGLI GDVSQRLLGS PVQFSHSHRP ATSSVNFIAA HDGFTAWDLV SYDEKHNEAN
GEDNRDGHSH NLSHNLGAEG PTDDPGILEA RLRRVKAMLA TLFLSQGVPM ILAGDEFGQS
QQGNNNAYCQ DNEIAWLDWE EARDELIRAV ADLAEFRKAD GGISRARFAV GPDAVQHDTP
VATWLHPAGR EMEEGDWNEG ELRLFALRLD LPRGRDLLVV LNAGDDGDFA LPEGEWRLKI
DTSRERIACD EPALGTLPVG WQSVMVLVAA EEAD
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