Gene RSP_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_2166 
SymbolputA 
ID3719635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp767735 
End bp771376 
Gene Length3642 bp 
Protein Length1213 aa 
Translation table11 
GC content73% 
IMG OID640070334 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_352218 
Protein GI77462714 
COG category[C] Energy production and conversion 
COG ID[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCCG CCGCTGTCCA TCCCACCTCT TCCGACACTC TCGACGAGGC GGGCCTCGTG 
GCGCGCCTGA TCGCCGAGGC CGATCTCGAC CCGTCCGCCC GTGCGCGCAT CGTGGACCGC
GGGGCGGATC TCGTCCGCCG CATCCGTCAG GGATCGCGGC CCGGGCTGAT GGAGGGCTTC
CTTGCGGAAT ACGGCCTCTC GACCGACGAG GGGATCGCGC TCATGTGCCT GGCCGAGGCG
CTGCTGCGGG TGCCGGATGC CGAGACGATG GATGCGCTGA TCGAGGACAA GATCGCGCCC
TCGGACTGGA ACCGGCATCT GGGGCGGTCG GCCTCGAGCC TTGTCAATGC CTCGACCTGG
GCGCTGATGC TGACGGGCAA GGTGCTCGAC GACCGCGAGC CGGGCGTGGC GGGCCATCTG
CGCGGCCTCG TGCGGCGGCT GGGCGAGCCG GTGATCCGCA AGGCCGTGGC CCGCGCCATG
AAGGAGATGG GGCGCCAGTT CGTGCTGGGC GAGACCATCG AGGGCGCGAT GGCGCGCGCG
GCCGAGCTGG AGGCCAAGGG CTACAGCTAC AGCTACGACA TGCTGGGCGA GGCTGCCCGG
ACCGAAGCCG ATGCGCGGCG CTATCATCTG GCCTATTCGC GCGCCATCAC CGCCATCGCG
GCGGCGGCGA AGAGCCGTGA CATCCGCGAC AATCCGGGGA TCTCGGTCAA GCTCTCGGCG
CTGCATCCGC GCTACGAGGT GGCCAAGCGC ACCCGCGTGC TGGCCGAGCT CGTGCCGCGC
GTGACGGCGC TGGCGGGGCT GGCGCGGGCG GCGGGCCTCG GCTTCAACAT CGACGCCGAG
GAGGCCGACC GGCTCGATCT CTCGCTCGAG GTGATCGCGG CCGCACTGGC CGAGCCGTCG
CTTGCGGGCT GGGACGGGTT CGGCGTGGTG GTGCAGGCCT ACGGTCGCCG CGCGGGCGAG
GTGCTGGACC GGCTTTATGG CATGGCCGTG CGGCTCGACC GCAAGCTGAT GGTGCGGCTC
GTGAAGGGCG CCTACTGGGA CGGCGAGGTG AAGCGGGCGC AGGTGCTGGG TCTGGACGAC
TTCCCGGTCT TCACCCGCAA GATGGCGACG GATGTGAGCT ACATCGCGCA GGCCCGCAAG
CTCTTCTCCA TGTCCGACCG GATCTATCCG CAGTTCGCCA CCCACAATGC CCATACGGTG
GCCGCGATCC TCGAGCTGGC CGAGGGGCGC CCGTTCGAGT TCCAGCGCCT GCACGGCATG
GGCGAGCGGC TGCATGACCT CGTGCTGACC GAAGAGAAGA CGCGCTGCCG GATCTATGCG
CCGGTGGGCG CGCACCGCGA TCTTCTGGCC TATCTGGTGC GCCGCCTGCT CGAGAACGGG
GCCAATTCGA GCTTCGTGAA CCAGATCGTC GATGAGAGCG TGAGCCCTGA GGCGGTGGCG
GCCTGCCCGC TCACCGCGAT GGAGCGGACG GAGCCCGTGC GCAACCCGGT GCTGCGCGCC
GGCACCGACC TCTTTCCCGG GCGCAGGAAC TCGCGCGGCT TCGATCTCGC CTCGGCCGAG
GATCTGGCGC TGATCGAGAG CGCGCGCAGC CCCCACCGGA CGGCGCTGTT CGATGCGCGG
CCGATCCTCG CGGAATCGCT CGCGGGCGGG CAGCGGGCCG AGGTGACGGA TCCTTCCACC
GGGGCGCGGG TGGGCAATGT GCTGCCCGCG AGCCTGCCCG ATGTGGAGAC CGCGCTCCAT
CATGCCGTGC CGTGGGAGGC GCGCCCCGAG GACCGGGCAG AGGTGCTGCG CCGCGCGGCC
GACCTCTACG AGGCGAGCTT CGGCCCGATC TTCGCCCTTC TGGCGCGCGA GGCGGGCAAG
ACGCTGCCCG ATGCGGTGGG CGAGCTGCGC GAGGCGGTGG ATTTCCTGCG CTACTATGCG
GCCGAGGGCG AGGCGCTGAC TGCGCCGCCT CTGGGCACCG TGGTCTGCAT CAGCCCCTGG
AACTTCCCGC TTGCGATCTT CACCGGCCAG ATCGCGGCCG CGCTGATGGC GGGCAATGCG
GTGCTGGCCA AGCCCGCCGA ACAGACGCCG CTGATCGCGG CTCTCGCGGT CGAGCTTCTG
CACCGGGCGG GCGTGCCCGT CACCGCGCTC CAGCTTCTGC CGGGCGAGGG CGGGACGGTG
GGTGCGGCCC TCACGCGCGA TCCGCGGGTG GGGGGCGTGG TCTTCACCGG CTCGACCGAG
ACGGCGCGGG CGATCCGGCA GAGCATGGCG GCCCATCTCG ATCCCGCGGC CCCGCTCATC
GCCGAGACCG GCGGCCTCAA TGCGATGATC GTCGATTCGA CCGCGCTGCC CGAGCAGGCG
GTGCGCGACA TCCTCGCCTC GGCCTTCCAG TCGGCGGGCC AGCGCTGCTC GGCGCTCCGT
TGCCTCTATC TGCAGGAGGA TGTGGCCGAG GGCGTGCTCG AGATGCTCTT CGGCGCGATG
GACGAGCTGC AGGCGGGCGA GCCCTGGGAT CTGGCAACCG ACCTGAGCCC GGTGATCGAT
GCCGAGGCGC AGGCGGGCAT CCGCGACTGG ATCGCCGCCG CCCGCGCCGA GGGGCGGGTG
CTGAAGCAGC TGGCGGTGCC CGCGCGCGGC ACCTTCGTCG GCCCGACGGT GATCCGCGTG
GGCTCGATCC GCGAGATGGA CCGCGAGATC TTCGGGCCGG TCCTGCATGT CGCGACCTTC
CGCGCCACCG AGATCGACCG GGTGATCGCC GAGATCGACG CCACGGGCTA CGGGCTGACC
TTCGGCCTGC ACAGCCGGAT CGACGACCGG GTGCAGGCGC TGGTGGGCCG GCTGCGGGTG
GGCAACATCT ACGTCAACCG CAACCAGATC GGCGCCGTGG TGGGCAGCCA GCCCTTCGGC
GGCGAGGGGC TCTCGGGCAC CGGGCCGAAG GCGGGCGGCC CGGCCTATCT GGCGCGGCTG
GTGAGCCGGC CCGCGCCGGA TTGCGCCGGG AGCGAGGCGC CCGCGCAGCC CGCGGCCGAG
GTGCAGGCGG CGCTCGACCG CCTCGCGCCC AAGGCCGGAG AGCTCATCGG CACCCACGCA
CTGCCGGGGC CCACGGGCGA GTCGAACCGC CTCTCGCTCC TCCGCCGTCC GCCGCTCCTC
TGCCTCGGGC CGGGCGCGGC CGCCGCCCGG GCGCAGGCCG AGGCGGTGCG CACGCTCGGC
GGGCTCGCGG TCGAGGCGCC GGGCCTCGCG CCCGAGGCGC TGGCCACGCT TCGCGGCTTC
GCGGGCGCGC TCTTCTGGGG CGGGGCCGGG GACGCGCGAC CCCGGGCGCA GGCGCTGGCG
TCGCGCGAGG GGGCGATCCT GCCGCTGATC GGCGGCCTGC CCGACGAGGC CCATGTCGCG
GTGGAGCGGC ATCTCTGCAT CGACACCACC GCCTCGGGGG CAATGCCGAA CTTCTCGCCG
CGGCCTCCGG CGGGCGGTAG GAGGCCCGGC CGCCGCACGC GGCTGCGGAG GAAGCGGCCC
GTGCGCTGGA GAAAGACGGA TCCCGAACGG GGCCGGCGGG CGGCGTCTTC GCCCGCCCGT
CCGGCGCAGG GGGATGGGCT CCGGCGCCCG GGCTGCCCCT GCCTTGGCGC GGTCCGGGCG
ATCGCGTCCG GCGGCATCCG CAGGGCTGCG TTCCGCGCTT GA
 
Protein sequence
MLAAAVHPTS SDTLDEAGLV ARLIAEADLD PSARARIVDR GADLVRRIRQ GSRPGLMEGF 
LAEYGLSTDE GIALMCLAEA LLRVPDAETM DALIEDKIAP SDWNRHLGRS ASSLVNASTW
ALMLTGKVLD DREPGVAGHL RGLVRRLGEP VIRKAVARAM KEMGRQFVLG ETIEGAMARA
AELEAKGYSY SYDMLGEAAR TEADARRYHL AYSRAITAIA AAAKSRDIRD NPGISVKLSA
LHPRYEVAKR TRVLAELVPR VTALAGLARA AGLGFNIDAE EADRLDLSLE VIAAALAEPS
LAGWDGFGVV VQAYGRRAGE VLDRLYGMAV RLDRKLMVRL VKGAYWDGEV KRAQVLGLDD
FPVFTRKMAT DVSYIAQARK LFSMSDRIYP QFATHNAHTV AAILELAEGR PFEFQRLHGM
GERLHDLVLT EEKTRCRIYA PVGAHRDLLA YLVRRLLENG ANSSFVNQIV DESVSPEAVA
ACPLTAMERT EPVRNPVLRA GTDLFPGRRN SRGFDLASAE DLALIESARS PHRTALFDAR
PILAESLAGG QRAEVTDPST GARVGNVLPA SLPDVETALH HAVPWEARPE DRAEVLRRAA
DLYEASFGPI FALLAREAGK TLPDAVGELR EAVDFLRYYA AEGEALTAPP LGTVVCISPW
NFPLAIFTGQ IAAALMAGNA VLAKPAEQTP LIAALAVELL HRAGVPVTAL QLLPGEGGTV
GAALTRDPRV GGVVFTGSTE TARAIRQSMA AHLDPAAPLI AETGGLNAMI VDSTALPEQA
VRDILASAFQ SAGQRCSALR CLYLQEDVAE GVLEMLFGAM DELQAGEPWD LATDLSPVID
AEAQAGIRDW IAAARAEGRV LKQLAVPARG TFVGPTVIRV GSIREMDREI FGPVLHVATF
RATEIDRVIA EIDATGYGLT FGLHSRIDDR VQALVGRLRV GNIYVNRNQI GAVVGSQPFG
GEGLSGTGPK AGGPAYLARL VSRPAPDCAG SEAPAQPAAE VQAALDRLAP KAGELIGTHA
LPGPTGESNR LSLLRRPPLL CLGPGAAAAR AQAEAVRTLG GLAVEAPGLA PEALATLRGF
AGALFWGGAG DARPRAQALA SREGAILPLI GGLPDEAHVA VERHLCIDTT ASGAMPNFSP
RPPAGGRRPG RRTRLRRKRP VRWRKTDPER GRRAASSPAR PAQGDGLRRP GCPCLGAVRA
IASGGIRRAA FRA