| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2039 |
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| Symbol | linC |
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| ID | 3719429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 634626 |
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| End bp | 635378 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640070203 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_352091 |
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| Protein GI | 77462587 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.456513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTCTGA ACGGAAAGAC GATCATCATT TCTGGCGCAA GCAGCGGCAT CGGGGCCGCA
GCGGCGAGGC TTTTTGCGGC GGAGGGGGCG CGCCTGATCC TCGGCGCGCG TCGTGCCGCG
CTGCTGGAGG AGATCACGAA CGAGATCCTG GCCGGAGGTG GCGAAGCGGA TTTCGTCGTC
GGAGACGTCG AGGACAGCGG TTTCGCGGCA GAGCTGGTTC AAAGAGCCGA AGACCGCTTC
GGCGGACTTG ACGGTGCCTT CAACAATGCC GGGGTGACCG GGGAGATGTG TCCCATCCCC
GACATGCCCG AAAGCAACTG GCACAAGGTG ATCGCGGTGA ATCTCAGCAG CGGATTTTAC
GCGGCAAAGC ATCAGATACC TGCCATGCGC AAACGCGGCG GTGGCTCGAT TGTTTTCACC
TCCTCCTTCG TGGGACACAC GATCGGGCTC CCCGGCATGG GCGCCTATGC CGCAGCGAAG
GCGGGCCTGA TCGGCATGAC TCAGGTTCTG GCCGCGGAAC ATGGACCCGA GAAGATCCGC
GTCAACGCGC TCCTCCCGGG CGGGACCATG ACGCCGATGG CCGGAGAGGA CGCCGGCTTT
CATGAGGTCG TGCGGGGTTT CCACGCGCTG AAACGCATGG CGGATCCATC CGAGATCGCG
CAGGCGGCGC TTTTCCTGCT CTCCGATCAG GCGTCATTCG TGACCGGGAC CGCACTGATC
GCGGACGGGG GAAATTCGAT CAGCAAGCTC TAG
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| Protein sequence | MLLNGKTIII SGASSGIGAA AARLFAAEGA RLILGARRAA LLEEITNEIL AGGGEADFVV
GDVEDSGFAA ELVQRAEDRF GGLDGAFNNA GVTGEMCPIP DMPESNWHKV IAVNLSSGFY
AAKHQIPAMR KRGGGSIVFT SSFVGHTIGL PGMGAYAAAK AGLIGMTQVL AAEHGPEKIR
VNALLPGGTM TPMAGEDAGF HEVVRGFHAL KRMADPSEIA QAALFLLSDQ ASFVTGTALI
ADGGNSISKL
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