| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2026 |
|---|
| Symbol | |
|---|
| ID | 3719360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 624857 |
|---|
| End bp | 625834 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640070190 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_352078 |
|---|
| Protein GI | 77462574 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACG GAAACGCCAG TTTCCGGACG CAGCGTTTCA CGGGCGGCGA TGCGGCGCAG
CCCCTGCCGT CGATCATGTT CGCCGAACGG CGCAGGCTGG CCATCCTCGG CGAAAACGGG
TTCGTCGAGA CCTGCGTGCG GACCATCGAG GGCAGCGACA TCGTCTTCGG CAGTGTCCGG
TCGTCCGGGC ATGTGATCGA GCTTCGCGAG CCGGATCGGT TGACCCTCCT TCTGCCGAGG
GCGGGGCGCC TGCGGGTGCG GATCGGGTCT GCCGAGCATG GCGTGACGCC GGGCTGCCCC
ATGGCCTTCC GGCCGGGCGA GCGGGTGACC GACGCCACCG CCGGCCGCGA CGGGCTCTTC
GCCGCGATCA CGCTGCAGGT GCCCGCCGCG CGGGTCCGGG CGCTGGCCGA GGCGGCCGAG
CTACCGCTGC GGGGTCTGCT CGGCCCGGAT GCCGTGGCCC TGCGCGCCCG GCTCGAGGCT
TCGGCGCTGG AGGGCATGGC CCGGCTGGCC TGCGACCTCT TCCTGCGGCC GAAGACCGCC
CTTCCGCCCG GCGTCGCTCT GGCGATCACC GACTTCGTGG ATGCGCAGCT GCTGGCCCTG
ATGGACGGCC GGCCTGCTCC GGCCCGATGC CGCGTCCTGT CGGCCTTCCA CCGCGTGCGG
GCGGCCGAAG AGATCATGCA TGCCCACAGC GAAGAGCCGC TCGCCATGCT CGATCTCGCA
CGACGTCTGG ATATCGGCCT GCGCAGCCTG CAGCTGGCCT TCCGCGAGGT GCATGACGGC
CTCTCGCCGC GCGAGGTCTA CAGCCGGATC CGGCTGGACC GCGCGCGGCA GCGGCTGCTG
GCGGCTTCGG GGGCCGATCG GGTGACGACC ATCGCGCTCG ACAGCGGCTT CGGTCATCTC
GGGCGGTTCG CCATGGCCTA TGCGCGCACC TTCGGCGAGC TGCCGAGCGA GACGCTTGCC
CGCCGCCGCA GGATTTGA
|
|---|
| Protein sequence | MPDGNASFRT QRFTGGDAAQ PLPSIMFAER RRLAILGENG FVETCVRTIE GSDIVFGSVR
SSGHVIELRE PDRLTLLLPR AGRLRVRIGS AEHGVTPGCP MAFRPGERVT DATAGRDGLF
AAITLQVPAA RVRALAEAAE LPLRGLLGPD AVALRARLEA SALEGMARLA CDLFLRPKTA
LPPGVALAIT DFVDAQLLAL MDGRPAPARC RVLSAFHRVR AAEEIMHAHS EEPLAMLDLA
RRLDIGLRSL QLAFREVHDG LSPREVYSRI RLDRARQRLL AASGADRVTT IALDSGFGHL
GRFAMAYART FGELPSETLA RRRRI
|
|---|
| |