Gene RSP_2008 details

Gene Information

• Locus tag: RSP_2008
• Symbol: argD
• ID: 3719341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 609595
• End bp: 610776
• Gene Length: 1182 bp
• Protein Length: 393 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640070171
• Product: acetylornithine transaminase protein
• Protein accession: YP_352059
• Protein GI: 77462555
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR00707] acetylornithine and succinylornithine aminotransferases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTCCG CCGTCCTGCC GACCTATAAC CGCGCGCCCC TCGCCTTCGT TGCGGGCGAG 
GGCTCCTGGC TCACCGCCGA GGACGGCAGC CGATACCTCG ACCTGGGCGC CGGCATCGCG 
GTGAATGCGC TGGGCCACGC CAATCCCGCG CTCGTCGAGG TGATCTCGGC GCAGGCCGCG 
AAGCTCTGGC ATGTCTCGAA CCTCTACCGC ATCCCCGAGC AGGAGCGGCT GGCCGAGAAG 
CTGGTCGAAG CGACCTTCGC CGACACGGTG TTCTTCACCA ACTCGGGCAC CGAGGCCGCG 
GAACTCTCGA TCAAGATGGT GCGGAAATAC TGGTCCGAGA AGGGCCAGCC CGACCGGATC 
GAGATCCTCT GCTTCGAGGG CGCCTTCCAC GGCCGTTCGA CCGGCGCCAT CGCGGCGGCG 
GGCTCGGAAA AGATGACCAA GGGCTACGGG CCGCTGATGC CGGGCTTCCG GCAGCTGCCC 
TTCGGCGATC ACGAGGCGCT GCGGGCGGCC ATCTCGGAGA AGACCGCGGC CGTGATGCTC 
GAGCCCGTGC AGGGCGAGGG CGGGATCCGC GTCCTGCCCG ACGTCTGCCT CAAGGGGCTG 
CGCGACGCCT GCGACGCCGT GGGCGCGCTT CTCGTCTTCG ACGAGGTGCA GTGCGGCATG 
GGGCGCACGG GCAGGCTCTT CGCCCATGAA TGGGCGGGGA TCGAGCCCGA CATCATGATG 
GTGGCCAAGG GCATCGGCGG GGGCTTTCCG CTGGGCGCGG TGCTGGCGAA GAAAGCCGCG 
GCCGCGGCCA TGACCGCAGG CACCCACGGC TCGACCTACG GCGGCAACCC CCTGGGCTGC 
GCAGTGGGCG CGAAGGTCAT GGAGATCGTG GCCGATCCCG CCTTCCTCGC CGAGGTGAAC 
CGCAAGGCCG CGCTCTTCCG CCAGAAGCTC GAGGGGCTGG TCGCGGCCCA TCCGCAGGTC 
TTCGAGGAGG TGCGTGGCGC GGGCCTGATG CTCGGCCTCA AGTGCCGGGC GCCGAATGCC 
GATCTGGTGA AGGCGGCCTA CGGCCAGCAT CTGCTGACCG TGCCCGCGGC CGACAATGTG 
GTGCGCCTGC TGCCCGCGCT CAACATTCCC GACGAGGACA TCGCCGAGGC GGTGGCGCGG 
CTCGACCGGG CGGCGGGGAC GCTCGATGCC GATGCGGCCT GA 

 

Protein sequence

MISAVLPTYN RAPLAFVAGE GSWLTAEDGS RYLDLGAGIA VNALGHANPA LVEVISAQAA 
KLWHVSNLYR IPEQERLAEK LVEATFADTV FFTNSGTEAA ELSIKMVRKY WSEKGQPDRI 
EILCFEGAFH GRSTGAIAAA GSEKMTKGYG PLMPGFRQLP FGDHEALRAA ISEKTAAVML 
EPVQGEGGIR VLPDVCLKGL RDACDAVGAL LVFDEVQCGM GRTGRLFAHE WAGIEPDIMM 
VAKGIGGGFP LGAVLAKKAA AAAMTAGTHG STYGGNPLGC AVGAKVMEIV ADPAFLAEVN 
RKAALFRQKL EGLVAAHPQV FEEVRGAGLM LGLKCRAPNA DLVKAAYGQH LLTVPAADNV 
VRLLPALNIP DEDIAEAVAR LDRAAGTLDA DAA