Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1929 |
Symbol | pyrE |
ID | 3719238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 527494 |
End bp | 528192 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640070091 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_351980 |
Protein GI | 77462476 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0430613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCCCA CCTCCTTTCC GCCGCGCGAG GAGATCGCCC GTCTGACGGC GCGGATGCTG CTCGAGATCG AGGCGGTGCA TTTCCGCCCG CAGGAGCCCT TCACGCTGGC CTCGGGTCTG CCCTCGCCCA CCTATATCGA CTGCCGCAAG CTGATCTCCT ATCCGCGCAT CCGGTCGACG CTGATGGATT TCATGGCGGT GACGCTTCTG CGCGACGCGG GCTTCGAGGC CTTCGACAAT ATCGCGGGCG GCGAGACGGC CGGGATCCCC TTCGCGGCGC TGGTGGCCGA GCGGCTGGGC CTGCCCATGA CCTATGTGCG CAAGAAGCCC AAGGGCTACG GCCGCAACGC CCGGATCGAG GGGGTCATGA CCGAGGGTCA GCGCGTGCTT CTGGTCGAGG ATCTGACCAC CGACGGCGGC TCGAAGCTCT CGTTCGTCGA TGCGATCCGC GAGACGGGCG CCAGCTGCGC CCATACGGCG GTGATCTTCT ACTACGGGAT CTTTCCCGAA ACGATCGGAC GGCTGCAGGC GCACGGGGTC ACGCTGCATC ATCTGTGCAC CTGGTGGGAT GTGCTGGCCG AGGCGCGCGC CTCGGGCACG TTCGACGCGG GCACGCTGGC CGAGGTCGAG AGCTTCCTGT CCAACCCCCG CGACTGGCAG GACGCGCGGA AACCGGCCGA TCCGACGAAG AGCCTCTGA
|
Protein sequence | MIPTSFPPRE EIARLTARML LEIEAVHFRP QEPFTLASGL PSPTYIDCRK LISYPRIRST LMDFMAVTLL RDAGFEAFDN IAGGETAGIP FAALVAERLG LPMTYVRKKP KGYGRNARIE GVMTEGQRVL LVEDLTTDGG SKLSFVDAIR ETGASCAHTA VIFYYGIFPE TIGRLQAHGV TLHHLCTWWD VLAEARASGT FDAGTLAEVE SFLSNPRDWQ DARKPADPTK SL
|
| |