| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1914 |
|---|
| Symbol | |
|---|
| ID | 3719221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 511745 |
|---|
| End bp | 512443 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640070074 |
|---|
| Product | 3-ketoacid CoA transferase alpha subunit |
|---|
| Protein accession | YP_351964 |
|---|
| Protein GI | 77462460 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.507414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGG TCTATGACAG CGCGGCCGCC GCGCTGGACG GGCTGCTGTT CGACGGGATG
CTGATCGCGG CCGGTGGCTT CGGTCTCTGC GGCATCCCCG AACTGCTGAT CCGGGCAATC
CGCGAGGCGG GCACCAGGGA CCTCACCGTC GCCTCGAACA ACGCAGGCGT CGACGGCTTC
GGTCTGGGCG TCCTCCTCGA GTCGCGCCAG GTCCGGAAGA TGATCTCTTC CTATGTGGGC
GAGAATGCCG AATTCATGCG GCAGTATCTC TCGGGCGAGC TGGAGCTCGA ATTCAATCCG
CAGGGGACGC TGGCCGAGCG GATGCGGGCG GGCGGCGCGG GCATCCCGGG CTTCTACACC
AGGACGGGCG TGGGCACCGT GATCGCCGAG GGCAAGGAGC ACAAGGAGTT CGACGGCGAG
ACCTACATCC TCGAGCGCGG GATCGTGGCG GATCTCTCGA TCGTCAAGGC CTGGAAGGCG
GACCCTTCGG GCAACCTCGT CTTCCGCAAG ACCGCGCGCA ACTTCAACCC GCCGGCCGCC
ACCTGCGGCA AGGTCTGCGT GGCCGAGGTC GAGGAGATCG TGCCGCTGGG CAGCCTCGAG
CCGGACTCGA TCCACCTGCC GGGGATCTAT GTGCATCGCC TGATCCAGGG CACGCACGAG
AAACGCATCG AACAGCGCAC CGTCCGCAAG CGCGCCTGA
|
|---|
| Protein sequence | MKKVYDSAAA ALDGLLFDGM LIAAGGFGLC GIPELLIRAI REAGTRDLTV ASNNAGVDGF
GLGVLLESRQ VRKMISSYVG ENAEFMRQYL SGELELEFNP QGTLAERMRA GGAGIPGFYT
RTGVGTVIAE GKEHKEFDGE TYILERGIVA DLSIVKAWKA DPSGNLVFRK TARNFNPPAA
TCGKVCVAEV EEIVPLGSLE PDSIHLPGIY VHRLIQGTHE KRIEQRTVRK RA
|
|---|
| |