Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1880 |
Symbol | |
ID | 3719147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 478176 |
End bp | 479735 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640070039 |
Product | hypothetical protein |
Protein accession | YP_351930 |
Protein GI | 77462426 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGGGA AATATCTAGT CACCGCCAGC CTCGCTGCCC TCATCGGCCT GGCCCCGGCC GAGCCTGTGA AGGCGGATGC GGGCGACGCC ATCGCGGGGG CGCTCGTGGG CGGCATCATC GGCCATGCGA TCGCCAACGA CCAGAACCGC CGCCGCGCCC AGCAGCAGCA GGTCTATCGC CGGGCCCCGG CCAAGGCCAC CATGTCCAGC GCCCAGCGGG AGCAGAACAA GGAGGTGCAG ACGGCCCTCA ACTACTTCGG CTATCCGGTG GGGACGGTGG ACGGGGTGCT GGGGTCGCGC TCGCGCTCGG CGGTGTCGCA GTTCCAGGTG CTGATGGGCT ACCAGCCGAC CGGCCAGCTC ACGGAATACG AGCGGACGAT CCTGACCACC GCCTATCACC GCGGCATCGC CGGCGGTCCG ATGGTGCAAC AGGCGATCGC GACCCATCCG CAGGGGATGC GCGGGCTTCT CCTGATGCAG CGCGACGAGA TGGCGGGGCT GCCCGCCGCG CAGTCGGCCA TGGCGCTGAT GCCGCAGGCG CCGGCTCCGC AGATGCCGAT GGCCGTGACG GCCCCCGTTC TGCCGGTGGC CCCCGCGGCG GCCGCAGCCG GGGCTGCCGC AGCCGTTCTG CCGGAGCTGC CCGCTCCCGT GGCCGAGCCT GCGCCGGCGG CGCCCGAGCT TCCCTCGTTC CTGGGATCGG GGGCGACGAT GGCCTCGCTC GCCTCGCACT GCAACACGAT CGGGCTGCAG ACCAACGCGA ACGGGGGCTA CACGACCTCG GCCGGCATGA CCGATGCGAG CTTTGCCCTG GGCGAGCAGT TCTGCCTCGC GCGGAGCTAC GCGATCTCGG CCAGCGAGGA GCTGACGAAG CAGGTGCAAG GCTTCACGCC GCAGCAGATC GCCGACCAGT GTCAGGCGCT CGGGCCTGCG CTGCAGGATC AGGTCTCGGC GCTGTCGCTC GAGCCGCGCG ACGATGTGCT GAAGGATGTG TCGGCCTTCG TGCTGGCCTC GGGCCGGCCT CCGGCGCAGC TGGCGGGTTC GGCCCGGATC TGCCTCGGCA CGGGCTATGC GCAGGACCGC ATGGATGTGG CGGTGGCCTC GGCGCTCCTG CTGACTGCGC TCGGCCAGAA GGGCTATGCC GAGCTTCTGG GCCACCATCT GGCGCAGGGC TTCGGGGCGA GCCAGCGGCC CGATCTGGCG CTGGACTGGT ATCAGATGGG GCTCGACGCG GCCCAGTCCG GCACGGCCGT GTTCGGGCAG GGGATGCCCG ACCGGACCGA GGTGATTCGG AAAGCGGCCT ACACGGTCGG CGGGCGGGCG GATCTGATCG TGCCCCAGAC GCCCGCGCCG CTGCCGGTCT TCGCCCCGGT CACGCCCCCT CCGGTCGAGG TGGCGGCCCC TGCGCCTGCG CCCGTGGCAG CGCCGACGGT CGAGGCGGCG GCCTCCGCTC CGGCGCCCGC TCTGGCCCTT GCGGCACAGC CGTCCGGCGA GATGGCGGAG GCGGGCGCCA AGGCCGTCTC GGCCGCCGCG CGGCTGCCGT TCCTGCTTCT GGGCCAGTGA
|
Protein sequence | MYGKYLVTAS LAALIGLAPA EPVKADAGDA IAGALVGGII GHAIANDQNR RRAQQQQVYR RAPAKATMSS AQREQNKEVQ TALNYFGYPV GTVDGVLGSR SRSAVSQFQV LMGYQPTGQL TEYERTILTT AYHRGIAGGP MVQQAIATHP QGMRGLLLMQ RDEMAGLPAA QSAMALMPQA PAPQMPMAVT APVLPVAPAA AAAGAAAAVL PELPAPVAEP APAAPELPSF LGSGATMASL ASHCNTIGLQ TNANGGYTTS AGMTDASFAL GEQFCLARSY AISASEELTK QVQGFTPQQI ADQCQALGPA LQDQVSALSL EPRDDVLKDV SAFVLASGRP PAQLAGSARI CLGTGYAQDR MDVAVASALL LTALGQKGYA ELLGHHLAQG FGASQRPDLA LDWYQMGLDA AQSGTAVFGQ GMPDRTEVIR KAAYTVGGRA DLIVPQTPAP LPVFAPVTPP PVEVAAPAPA PVAAPTVEAA ASAPAPALAL AAQPSGEMAE AGAKAVSAAA RLPFLLLGQ
|
| |