Gene RSP_1830 details

Gene Information

• Locus tag: RSP_1830
• Symbol: surf-1
• ID: 3719097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 421826
• End bp: 422497
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640069989
• Product: Surf1 protein
• Protein accession: YP_351880
• Protein GI: 77462376
• COG category: [S] Function unknown
• COG ID: [COG3346] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCC GGATGATCCT GCCCCTTCTC TTCGGCCTGA TCGGGGCGGC GATCCTCGTG 
TCGCTCGGCC TCTGGCAGGT GCAGCGGCTC CAGTGGAAGG AGGGGGTGCT GGCCGACATC 
GAGGCCCGCG TCGCGGCTCC GCCCGTGACC CTGCCCGAAG CGCCCGAAGC TGCGCGCGAC 
CGCTATCTGC CCGTCACCGT CTCGGGCCGC TTCACCGGCG AGCACATCGA CGTGCTCACA 
AGCCGCAAGG ACAGGGGCGC GGGCTACCGG GTGATCTCGG CCTTCGAGAC CGACGAGGGA 
CGCCGCATCC TGATCGACCG GGGCTTCCTT CCGCAGGAGG ATCGCGGCCT GCCGCGCACG 
GCGGTGGGGG CGGGCCTGAC CGGCAACCTC GCCTGGCCCG CGGAGGTGGA CAGCTTCACC 
CCGTCGCCCG ATCCGGTCTC CGGCATCTGG TTCGCCCGCG ACGTGCCCGC CATGGCCGAG 
GCGCTCTCGA CCGAGCCGGT CCTCGTGGTG GCCGCCACCC CCACCGGCGA CGGGATCGAC 
CCCTGGCCCA TCGGCACCGA AGGCATTCCG AACGACCATC TCGGCTATGC GGTGACGTGG 
TTTTCGCTTG CCGTTCTCTG GCTGGGGATG ACAGTCCTGC TGCTCTGGCG TATCAGGCGT 
CGGATGGAAT GA 

 

Protein sequence

MIRRMILPLL FGLIGAAILV SLGLWQVQRL QWKEGVLADI EARVAAPPVT LPEAPEAARD 
RYLPVTVSGR FTGEHIDVLT SRKDRGAGYR VISAFETDEG RRILIDRGFL PQEDRGLPRT 
AVGAGLTGNL AWPAEVDSFT PSPDPVSGIW FARDVPAMAE ALSTEPVLVV AATPTGDGID 
PWPIGTEGIP NDHLGYAVTW FSLAVLWLGM TVLLLWRIRR RME