Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1830 |
Symbol | surf-1 |
ID | 3719097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 421826 |
End bp | 422497 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640069989 |
Product | Surf1 protein |
Protein accession | YP_351880 |
Protein GI | 77462376 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCC GGATGATCCT GCCCCTTCTC TTCGGCCTGA TCGGGGCGGC GATCCTCGTG TCGCTCGGCC TCTGGCAGGT GCAGCGGCTC CAGTGGAAGG AGGGGGTGCT GGCCGACATC GAGGCCCGCG TCGCGGCTCC GCCCGTGACC CTGCCCGAAG CGCCCGAAGC TGCGCGCGAC CGCTATCTGC CCGTCACCGT CTCGGGCCGC TTCACCGGCG AGCACATCGA CGTGCTCACA AGCCGCAAGG ACAGGGGCGC GGGCTACCGG GTGATCTCGG CCTTCGAGAC CGACGAGGGA CGCCGCATCC TGATCGACCG GGGCTTCCTT CCGCAGGAGG ATCGCGGCCT GCCGCGCACG GCGGTGGGGG CGGGCCTGAC CGGCAACCTC GCCTGGCCCG CGGAGGTGGA CAGCTTCACC CCGTCGCCCG ATCCGGTCTC CGGCATCTGG TTCGCCCGCG ACGTGCCCGC CATGGCCGAG GCGCTCTCGA CCGAGCCGGT CCTCGTGGTG GCCGCCACCC CCACCGGCGA CGGGATCGAC CCCTGGCCCA TCGGCACCGA AGGCATTCCG AACGACCATC TCGGCTATGC GGTGACGTGG TTTTCGCTTG CCGTTCTCTG GCTGGGGATG ACAGTCCTGC TGCTCTGGCG TATCAGGCGT CGGATGGAAT GA
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Protein sequence | MIRRMILPLL FGLIGAAILV SLGLWQVQRL QWKEGVLADI EARVAAPPVT LPEAPEAARD RYLPVTVSGR FTGEHIDVLT SRKDRGAGYR VISAFETDEG RRILIDRGFL PQEDRGLPRT AVGAGLTGNL AWPAEVDSFT PSPDPVSGIW FARDVPAMAE ALSTEPVLVV AATPTGDGID PWPIGTEGIP NDHLGYAVTW FSLAVLWLGM TVLLLWRIRR RME
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