| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1768 |
|---|
| Symbol | |
|---|
| ID | 3718974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 351538 |
|---|
| End bp | 352398 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640069925 |
|---|
| Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase |
|---|
| Protein accession | YP_351816 |
|---|
| Protein GI | 77462312 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA CCGTCTATGT GAACGGGGAA TATCTCCCCG AGGAAGAAGC CACCGTCTCG
ATCTTCGACC GGGGCTTTCT CATGGCCGAC GGGGTCTATG AGGTGACATC CGTCCTCGGC
GGCAAGCTGA TCGACTTTCC GGGCCATGCG GCGCGGCTCG ACCGGTCGCT GACCGAACTC
GAGATGACCG CGCCGATGAA TGCCGAGGAC CTGCTCGAGG TGCACCGCGA ACTGGTCCGG
CGGAACGGGA TCGATGAGGG GCTGATCTAT CTCCAGATCA CCCGCGGCAA CCCGGGCGAC
CGCGACTTCG CCTTCCCGCC CGCGGATACG AAACCCACGG TCGTCCTCTT CACGCAGGCC
AAGCCGGGCC TTGCCGCCAA TCCCACGGCC AAGGTCGGCA TCAAGGTCAT CTCGATCCCG
GACATCCGCT GGGGCCGGCG CGACATCAAG ACGGTGCAGC TCCTCTATCC GTCCATGGCC
AAGATGGCGG CCAAGAAGGC GCATGTGGAC GATGCCTGGT TCGTCGAGGA CGGGCTCGTG
ACCGAGGGCA CCTCGAACAA CGCCTATATC GTGAAGGGCG GCAAGATCAT CACCCGCAAC
CTCTCCAACG ACATTCTGCA CGGCATCACC CGCGCGGCCG TCGTCCGCTT CGCCCGCGAA
GCGCAGATGG AGGTCGAGGA GCGCCCCTTC ACCATCGAGG AAGCGCAGGG CGCCGACGAG
GCCTTCTTCA CCTCGGCCTC GGCCTTCGTG ATGCCGGTGG TCGAGATCGA CGGCAAGGCG
GTGGGCACCG GCACCCCCGG CCCCGTCGCC GCCCGCCTGC GCGAGATCTA CCTCGACGAG
AGCCTCAAGG CCGCCGTCTG A
|
|---|
| Protein sequence | MSRTVYVNGE YLPEEEATVS IFDRGFLMAD GVYEVTSVLG GKLIDFPGHA ARLDRSLTEL
EMTAPMNAED LLEVHRELVR RNGIDEGLIY LQITRGNPGD RDFAFPPADT KPTVVLFTQA
KPGLAANPTA KVGIKVISIP DIRWGRRDIK TVQLLYPSMA KMAAKKAHVD DAWFVEDGLV
TEGTSNNAYI VKGGKIITRN LSNDILHGIT RAAVVRFARE AQMEVEERPF TIEEAQGADE
AFFTSASAFV MPVVEIDGKA VGTGTPGPVA ARLREIYLDE SLKAAV
|
|---|
| |