| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1758 |
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| Symbol | |
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| ID | 3718964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 340889 |
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| End bp | 342208 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640069915 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_351806 |
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| Protein GI | 77462302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGC TGTTGCCCTC GGGGGGCCGG TCGGGGCAGT CTGGCGGGAT GGATGACCGC
CGCCTCATCG CCGAAGTCGA GGCCCGCCGC GCCGATCTGG TGGCGCTGAC GCAGGATCTC
GTGCGCATTC CCACACTGAA CCCGCCGGGG CGGAACTACC GCGCGCTCTG CGACATGCTG
GCGGCCCGTC TCGCGCCGCA GTTCGAGGTC GAGCTGGTGC GGGCCCACGG CGCGCCCGGC
GATTCCGAGA CCTATCCGCG CTGGAACCTG ATCGCCCGGC GGCAGGGCGC GCGGGACGGC
GACTGCGTGC ATTTCAACTC GCATCACGAC GTGGTCGAGG TGGGCCACGG CTGGACGCGC
GACCCGTTCG GGGCCGAGGT CGAGGGCGAC CGGCTCTACG GACGCGGCGC CTGCGACATG
AAGGGCGGTC TCGCGGCCTC GGTGATCGCG GCCGAGGCCT TCCTTGCCGT CTGCCCGGAT
TTCGCCGGCA GCATCGAGAT CTCGGCCACC GCCGACGAGG AGTCGGGCGG CTTCGGCGGC
GTGGCCTATC TGGCCCGGCA GGGCCGTTTC GCCCATGTCC AGCATGTGCT GATCCCCGAA
CCCTTGCACA AGGACCGGAT CTGCCTCGGC CATCGCGGCG TCTGGTGGGC CGAGGTCGAG
ACGCAGGGGC GCATCGCCCA TGGCTCGATG CCCTTCCTCG GCGACAGCGC GATCCGGCAC
ATGGGCGCGC TTCTGGCCGA GATCGAGGAG CGGCTCTATC CGCTTTTGGC CACTCGCACC
ACCGCCATGC CGGTGACGCC CGAGGGGGCG CGGCAATCCA CGCTCAACAT CAATTCGATC
CACGGCGGCG AGCCCGAGCC CGAGCCGGGC TACACCGGCC TGCCCGCGCC CTGCGTGGCC
GACCGCTGCC GCATCGTGAT CGACCGCCGC TTCCTGATCG AGGAGGATCT GGACGAGGTG
AAGGCCGAGC TGCGCGCCCT GGCCGAGCGG CTGGCCGAGG CGCGGCCGGG CTTCGCCTTC
GAGATCCGCG ACCTGTTCGA GGTGCGCCCC ACCCTCACCG ACCGCGACGC GCCGGTGGTG
CGCTCGACCG CCGCCGCCAT CGAGCGCGTT CTGGCGCGGC AGGCGGAATA TGTGGTCTCG
CCCGGCACCT ACGATCAGAA GCACATCGAC CGGATCGGCA AGCTGAAGAA CTGCATCGCC
TATGGGCCGG GGCTGCTGCA TCTGGCGCAC CAGCCGGACG AATGGGTGGG CATCGCGGAC
ATGGTCGACA GCGCGAAGGT CATGGCGCTG GTGCTGGCGG ATCTGCTCGC CCCCGAGTGA
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| Protein sequence | MAALLPSGGR SGQSGGMDDR RLIAEVEARR ADLVALTQDL VRIPTLNPPG RNYRALCDML
AARLAPQFEV ELVRAHGAPG DSETYPRWNL IARRQGARDG DCVHFNSHHD VVEVGHGWTR
DPFGAEVEGD RLYGRGACDM KGGLAASVIA AEAFLAVCPD FAGSIEISAT ADEESGGFGG
VAYLARQGRF AHVQHVLIPE PLHKDRICLG HRGVWWAEVE TQGRIAHGSM PFLGDSAIRH
MGALLAEIEE RLYPLLATRT TAMPVTPEGA RQSTLNINSI HGGEPEPEPG YTGLPAPCVA
DRCRIVIDRR FLIEEDLDEV KAELRALAER LAEARPGFAF EIRDLFEVRP TLTDRDAPVV
RSTAAAIERV LARQAEYVVS PGTYDQKHID RIGKLKNCIA YGPGLLHLAH QPDEWVGIAD
MVDSAKVMAL VLADLLAPE
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