| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1712 |
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| Symbol | rpoC |
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| ID | 3718914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 297845 |
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| End bp | 302092 |
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| Gene Length | 4248 bp |
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| Protein Length | 1415 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640069865 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_351756 |
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| Protein GI | 77462252 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGG AACTCTCGAC CAATCCGTTC AACCCGGTTG CGCCGGTCAA GACCTTCGAC
GAGATCAAGA TCTCGCTCGC TTCGCCGGAA CGGATCCTCT CGTGGTCCTA CGGCGAGATC
AAGAAGCCCG AGACCATCAA CTACCGGACC TTCAAGCCCG AGCGCGACGG CCTGTTCTGC
GCGCGGATCT TCGGGCCGAT CAAGGACTAC GAGTGCCTCT GCGGCAAATA CAAGCGCATG
AAGTATCGCG GCGTCGTCTG CGAGAAATGC GGCGTTGAAG TCACGCTCCA GAAGGTGCGT
CGCGAGCGGA TGGGCCATAT CGAGCTCGCC GCCCCGGTCG CGCACATCTG GTTCCTGAAG
TCGCTGCCGA GCCGCATCGG CCTCATGCTC GACATGACGC TGCGGGATCT GGAACGCATC
CTCTACTTCG AGAACTACGT CGTCATCGAG CCGGGCCTGA CGGACCTCAC CTACGGTCAG
CTGATGACCG AGGAAGAGTT CCTCGATGCG CAGGACCAGT ATGGCGCCGA TGCCTTCACC
GCCAACATCG GCGCGGAAGC GATCCGCGAG ATGCTGTCGG CCATCGACCT CGAACAGACC
GCCGAGACGC TCCGCGAGGA GTTGAAGGAG GCCACGGGCG AACTGAAGCC GAAGAAGATC
ATCAAGCGGC TGAAGATCGT GGAATCGTTC CTCGAGTCGG GCAACCGGCC GGAGTGGATG
ATCCTGACCG TGCTGCCGGT GATCCCGCCG GAACTGCGCC CGCTGGTGCC GCTCGACGGT
GGCCGGTTCG CCACGTCGGA CCTGAACGAC CTCTACCGCC GCGTCATCAA CCGGAACAAC
CGCCTCAAGC GGCTGATCGA GCTGCGCGCG CCGGACATCA TCGTCCGCAA CGAAAAGCGG
ATGCTGCAGG AAGCCGTCGA CGCGCTCTTC GACAACGGCC GCCGCGGCCG CGTCATCACG
GGCACCAACA AGCGCCCGCT GAAGTCGCTG TCGGACATGC TCAAGGGCAA GCAGGGCCGG
TTCCGTCAGA ACCTGCTCGG CAAGCGCGTG GACTTCTCGG GCCGTTCGGT CATCGTGACC
GGGCCGGAGC TGAAGCTGCA CCAGTGCGGC CTGCCGAAGA AGATGGCGCT CGAGCTGTTC
AAGCCCTTCA TCTACTCGCG GCTGGAGGCC AAGGGCCTGT CCTCGACCGT GAAGCAGGCG
AAGAAGCTGG TGGAGAAGGA ACGCCCCGAG GTCTGGGACA TCCTGGATGA AGTGATCCGC
GAGCACCCGG TCCTCTTGAA CCGGGCGCCG ACGCTGCACC GTCTGGGCAT CCAGGCTTTC
GAGCCGATCC TGATCGAAGG CAAGGCGATC CAGCTGCACC CGCTGGTCTG CTCGGCCTTC
AACGCCGACT TCGACGGCGA CCAGATGGCC GTCCACGTCC CCCTCTCGCT GGAAGCCCAG
CTTGAGGCGC GCGTGCTGAT GATGTCGACC AACAACGTGC TGTCGCCCGC CAACGGCGCG
CCGATCATCG TGCCGTCGCA GGACATGGTT CTGGGGCTCT ATTACACCAC GATGGAGCGC
CGCGGCATGA AGGGCGAGGG CATGGCCTTC TCGTCCGTCG AAGAGGTCGA ACATGCCCTT
GCCGCCGGCG AGGTGCATCT GCACGCGACC ATCACCGCCC GGATCAAGCA GATCGACGAG
GAAGGCAACG AGGTCGTCAA GCGCTACCAG ACCACGCCGG GCCGCCTGCG GCTGGGCAAC
CTGCTGCCGC TGAACGCCAA GGCTCCGTTC GAGCTCGTGA ACCGTCTTCT GCGGAAGAAG
GACGTGCAGA ACGTCATCGA CACCGTCTAC CGCTACTGCG GCCAGAAGGA GTCGGTGATC
TTCTGCGACC AGATCATGGG CATGGGCTTC CGCGAAGCCT TCAAGGCCGG CATCTCGTTC
GGCAAGGACG ACATGCTGAT CCCGGACACC AAATGGCCGA TCGTGAACGA GGTTCGCGAT
CAGGTGAAGG AGTTCGAGCA GCAGTACATG GACGGCCTGA TCACTCAGGG CGAAAAGTAC
AACAAGGTCG TCGACGCCTG GTCGAAATGC TCGGACAAGG TGGCGGGCGA GATGATGGCC
GAGATCTCGG CGGTCCGGTA CGACGATGCC GGCGCCGAGA AGGAGCCGAA CTCGGTCTAC
ATGATGTCCC ACTCCGGGGC GCGGGGTTCG CCGGCTCAGA TGAAGCAGCT GGGCGGGATG
CGCGGCCTGA TGGCCAAGCC GAACGGCGAG ATCATCGAGA CGCCGATCAT CTCGAACTTC
AAGGAAGGCC TGACCGTGCT CGAGTACTTC AACTCGACCC ACGGCGCCCG GAAGGGTCTG
GCCGATACCG CGCTGAAGAC GGCGAACTCG GGCTACCTGA CCCGTCGTCT CGTGGACGTG
GCGCAGGACT GCATCGTGCG CACGCACGAT TGCGGCACCG AGAATGCGAT CACGGCCTCG
GCCGCGGTGA ACGAGGGCGA AGTCGTGAGC CCGCTGGCCG AGCGGGTCCT GGGCCGTGTC
GCGGCCGAGG ACATCCTCGT GCCGGGCTCG GACGAGGTGA TCGTGGCGCG CGGCGAGCTG
ATCGACGAGC GTCGGGCGGA TCTGGTCGAT CAGGCGAACG TGGCTTCGGT GCGCATCCGC
AGCCCGCTCA CCTGTGAAGC GGAAGAGGGC GTCTGCGCCA TGTGCTACGG GCGCGACCTT
GCCCGCGGCA CGCTCGTCAA CATCGGCGAG GCGGTGGGCA TCATCGCCGC CCAGTCGATC
GGCGAACCGG GTACGCAGCT CACGATGCGG ACCTTCCACA TCGGCGGCAT CGCGCAGGGC
GGCCAGCAGT CGTTCCTCGA GGCGTCGCAG GAGGGCCGGA TCGAGTTCCG CAACCCGAAC
CTGCTGGAGA ACGCCAACGG CGAGCAGATC GTCATGGGCC GCAACATGCA GCTCGCGATC
ATCGACGAGG CGGGGCAGGA GCGGGCGACG CACAAGCTGA CCTACGGCGC CAAGGTCCAT
GTCAAGGACG GCCAGACGGT CAAGCGGGCC ACGCGCCTGT TCGAATGGGA CCCCTACACC
CTGCCGATCA TCGCCGAGAA GGCCGGCGTG GCGCGGTTCG TGGATCTCGT CTCGGGCATC
TCGGTGCGCG AGGACACCGA CGAAGCCACC GGCATGACCC AGAAGATCGT GTCCGACTGG
CGCTCGACGC CGAAGGGCGG CGACCTGAAA CCGGAAATCA TCATCATGAA TCCGGAGACG
GGCGATCCGA TGCGGAACGA GGCGGGCAAC CCGATCTCGT ATCCGATGTC GGTCGAGGCG
ATCCTGTCGG TCGAGGACGG CCAGACCGTC CGGGCCGGCG ACGTGGTGGC GCGGATCCCG
CGCGAGGGTG CCCGGACCAA GGACATCACC GGGGGTCTTC CCCGCGTGGC GGAACTGTTC
GAGGCCCGTC GTCCGAAGGA TCACGCGATC ATCGCCGAGA ACGACGGCTA TGTGCGCTTC
GGCAAGGACT ACAAGAACAA GCGCCGCATC ACGATCGAGC CGGTGGACGA TACGCTGAAC
TCGGTCGAAT ACATGGTGCC GAAAGGCAAG CACATCCCGG TGCAGGAAGG CGACTTCGTG
CAGAAGGGTG ACTACATCAT GGACGGCAAC CCGGCTCCGC ACGACATCCT GCGGATCCTG
GGCGTCGAGG CGCTGGCCAA CTACATGATC GACGAAGTGC AGGAGGTCTA CCGACTGCAG
GGCGTGAAGA TCAACGACAA GCATATCGAG GTGATCGTGC GGCAGATGCT GCAGAAATAC
GAGATCCTCG ACTCGGGCGA GACCACGCTG CTCAAGGGCG AGCATGTGGA CAAGGCCGAG
CTTGACGAGG TCAACCAGAA GGCCATGGAC CACGGGATGC GGCCGGCTCA TGCCGAACCG
ATCCTGCTCG GGATCACCAA GGCGTCGCTG CAGACCCGCA GCTTCATCTC GGCGGCCTCG
TTCCAGGAGA CGACGCGCGT GCTGACCGAA GCCTCGGTGC AGGGCAAGCG CGACAAGCTC
GTTGGCCTGA AGGAGAACGT GATCGTCGGC CGGCTGATCC CGGCCGGGAC GGGCGGGGCC
ACCTCGCGCG TCAAGAAGAT CGCGCACGAC CGCGACCAGA AGGTGATCGA CACCCGCCGG
GCCGAGGCCG AATCCGCGGC GGCGCTGGCG GCGCCGACGG ACGGGGTGAT CGATCTCGGC
TCCGAGGACT CGGGGCTGGT GGAAACGGTG GAGAACCGCG AGGAGTGA
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| Protein sequence | MNQELSTNPF NPVAPVKTFD EIKISLASPE RILSWSYGEI KKPETINYRT FKPERDGLFC
ARIFGPIKDY ECLCGKYKRM KYRGVVCEKC GVEVTLQKVR RERMGHIELA APVAHIWFLK
SLPSRIGLML DMTLRDLERI LYFENYVVIE PGLTDLTYGQ LMTEEEFLDA QDQYGADAFT
ANIGAEAIRE MLSAIDLEQT AETLREELKE ATGELKPKKI IKRLKIVESF LESGNRPEWM
ILTVLPVIPP ELRPLVPLDG GRFATSDLND LYRRVINRNN RLKRLIELRA PDIIVRNEKR
MLQEAVDALF DNGRRGRVIT GTNKRPLKSL SDMLKGKQGR FRQNLLGKRV DFSGRSVIVT
GPELKLHQCG LPKKMALELF KPFIYSRLEA KGLSSTVKQA KKLVEKERPE VWDILDEVIR
EHPVLLNRAP TLHRLGIQAF EPILIEGKAI QLHPLVCSAF NADFDGDQMA VHVPLSLEAQ
LEARVLMMST NNVLSPANGA PIIVPSQDMV LGLYYTTMER RGMKGEGMAF SSVEEVEHAL
AAGEVHLHAT ITARIKQIDE EGNEVVKRYQ TTPGRLRLGN LLPLNAKAPF ELVNRLLRKK
DVQNVIDTVY RYCGQKESVI FCDQIMGMGF REAFKAGISF GKDDMLIPDT KWPIVNEVRD
QVKEFEQQYM DGLITQGEKY NKVVDAWSKC SDKVAGEMMA EISAVRYDDA GAEKEPNSVY
MMSHSGARGS PAQMKQLGGM RGLMAKPNGE IIETPIISNF KEGLTVLEYF NSTHGARKGL
ADTALKTANS GYLTRRLVDV AQDCIVRTHD CGTENAITAS AAVNEGEVVS PLAERVLGRV
AAEDILVPGS DEVIVARGEL IDERRADLVD QANVASVRIR SPLTCEAEEG VCAMCYGRDL
ARGTLVNIGE AVGIIAAQSI GEPGTQLTMR TFHIGGIAQG GQQSFLEASQ EGRIEFRNPN
LLENANGEQI VMGRNMQLAI IDEAGQERAT HKLTYGAKVH VKDGQTVKRA TRLFEWDPYT
LPIIAEKAGV ARFVDLVSGI SVREDTDEAT GMTQKIVSDW RSTPKGGDLK PEIIIMNPET
GDPMRNEAGN PISYPMSVEA ILSVEDGQTV RAGDVVARIP REGARTKDIT GGLPRVAELF
EARRPKDHAI IAENDGYVRF GKDYKNKRRI TIEPVDDTLN SVEYMVPKGK HIPVQEGDFV
QKGDYIMDGN PAPHDILRIL GVEALANYMI DEVQEVYRLQ GVKINDKHIE VIVRQMLQKY
EILDSGETTL LKGEHVDKAE LDEVNQKAMD HGMRPAHAEP ILLGITKASL QTRSFISAAS
FQETTRVLTE ASVQGKRDKL VGLKENVIVG RLIPAGTGGA TSRVKKIAHD RDQKVIDTRR
AEAESAAALA APTDGVIDLG SEDSGLVETV ENREE
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