| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1670 |
|---|
| Symbol | spoT/relA |
|---|
| ID | 3717936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 260559 |
|---|
| End bp | 262676 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640069827 |
|---|
| Product | RelA/SpoT family protein |
|---|
| Protein accession | YP_351719 |
|---|
| Protein GI | 77462215 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.443961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG TCGAAGACCT GATCGCCCTG GTCCGCAACT ACAACCCGCG CACCAATGCC
GACCTGATCC GCCGGGCCTA TGCCTACGGC CGGCAGATGC ACGAGGGCCA GTTCCGCCAC
TCGGGCGAGC CCTACTTCAC CCATCCAGTC GCCGTCGCCG CCATCCTGAC CGAGCAGCGG
CTCGATGACG CGACCATCGT GACGGCGCTG TTGCACGACA CGATCGAGGA CACGAAGTCC
ACCTACACCG AAGTCGCCCG TCTCTTCGGC GAGGATATCG CCGAGCTGGT GAACGGGGTC
ACGAAGCTCA CCAACCTCGA GCTCTCCTCG GCGCAATCCA AGCAGGCCGA GAATTTCCGC
AAGCTGTTCA TGGCGATGTC GAAGGATCTG CGGGTGATCC TCGTGAAGCT CGCCGACCGC
CTGCACAATA TGCGCACCAT CAAGTCGATG CGCCCCGAGA AGCAGGCCCA GAAGGCGCGC
GAGACGATGG AGATCTTCGC GCCGCTCGCG GGCCGCATGG GGATGCAGTG GATGCGCGAG
GAGCTGGAAG ACCTCGCCTT CCGCGTCCTG AACCCCGAGG CGCGCAACTC GATCATCCGC
CGCTTCATCA CGCTCCAGCG CGAGACGGGC GATGTGGTCC ACAAGATCAC CGCCGACATC
CGGCTGGAGC TGGAAAAGGC GCAGATCGAG GCCGACGTCT ACGGACGGGC CAAGAAGCCT
TACTCGATCT GGCGCAAGAT GCAGGAGAAG GATCTGGCCT TCTCGCGTCT CTCCGACATC
TACGGCTTCC GCGTCATCTG CAAGGATGTG GCCGACTGCT ACCGCATCCT CGGCGTGATC
CACCAGCGTT GGCGCGCGGT GCCGGGGCGG TTCAAGGACT ATATCAGCCA GCCCAAGTCG
AACGGCTACC GCTCGATCCA CACGACGGTC TCGGGGCGCG ACGGCAAGCG GGTCGAGGTG
CAGATCCGCA CCCGCCAGAT GCACGAGGTG GCCGAGGCCG GCGTGGCCGC GCACTGGAGC
TACCGCGAGG GCGTGCGCGT CCACAACCCG TTCGCCGTCG ATCCCGCCCG CTGGATCGCG
AGCCTGACCG AACGGCTGGA CGAGGACGAC CATGACGAGT TCATGGAGAA CGTGAAGCTC
GAGATGTACA CCGACCAGGT GTTCTGCTTC ACGCCGAAGG GCGACGTGAT CCAGCTGCCG
CGGGGGGCGA CGCCGCTCGA TTTCGCCTAT GCGATCCACA CCCGCATCGG CCATTCCACC
GTCTCGGCCA AGGTCGACGG CATCCGCGTG CCGCTCTGGA CCCGGCTGAA GAACGGCCAG
TCGGTCGAGA TCATCACCGC CGAGGGGCAG CGCCCGCAGG CCTCCTGGAT CGACATCGTG
ACGACGGGGC GGGCCAAGGC CGCGATCCGG CGCAGCCTGC GCGAGGAGGA CCGGGGCCGC
TTCGTGAAGC TCGGGCAGGA ACTCGTGCGC GCGGCCTTCG ACCATGTGGG GCGCAAGGCC
ACCGACAAGG CGCTTAGGAC GGCGGCGAAG ATGCTGGGCC TCTCGGACGA GACCGAGCTT
CTGGCGCAGC TGGGCTCTGC CGAGCTGACC GCGCGCAAGG TGGTCGAGAC CCTTTATCCC
GAACTCGTGC GCTCGAGCGG GCCCGAGGTC GACATGCAGC GCCCGGTGGT CGGCCTGTCC
GACGATCAGC AGTTCCGTCG CGCCAAATGC TGCCAGCCGG TGCCGGGCGA GCGGATCGTG
GGCATCACCT ACCGCGGGCA GGGCGTGGTC ATCCATGCCA TCGACTGCCC GGCCCTCGAG
GAGTTCGAGG AACAGCCCTC GCGCTGGATC GACCTGCACT GGCACGCCGG GCGCCATGCG
CCTGTCCACA CCGTGACGCT CGATCTCACG ATTTCGAACG ATGCGGGCGT TCTGGGACGG
ATCTGCACCT TGATCGGAGA GCAGAAGGCC AATATCTCGG ACCTGAGGTT CACCGATCGC
AAGCCCGACT TCTATCGCCT TCTGGTCGAT GTGGATCTGT GCGATGTCGA ACATCTGCAC
ACGCTGATGA CCGCCCTCGA AGCCGAGACG GATGTGGCGC AGATATCCCG GCACCGCGAT
CTGAGCAGGA AACCCTGA
|
|---|
| Protein sequence | MIDVEDLIAL VRNYNPRTNA DLIRRAYAYG RQMHEGQFRH SGEPYFTHPV AVAAILTEQR
LDDATIVTAL LHDTIEDTKS TYTEVARLFG EDIAELVNGV TKLTNLELSS AQSKQAENFR
KLFMAMSKDL RVILVKLADR LHNMRTIKSM RPEKQAQKAR ETMEIFAPLA GRMGMQWMRE
ELEDLAFRVL NPEARNSIIR RFITLQRETG DVVHKITADI RLELEKAQIE ADVYGRAKKP
YSIWRKMQEK DLAFSRLSDI YGFRVICKDV ADCYRILGVI HQRWRAVPGR FKDYISQPKS
NGYRSIHTTV SGRDGKRVEV QIRTRQMHEV AEAGVAAHWS YREGVRVHNP FAVDPARWIA
SLTERLDEDD HDEFMENVKL EMYTDQVFCF TPKGDVIQLP RGATPLDFAY AIHTRIGHST
VSAKVDGIRV PLWTRLKNGQ SVEIITAEGQ RPQASWIDIV TTGRAKAAIR RSLREEDRGR
FVKLGQELVR AAFDHVGRKA TDKALRTAAK MLGLSDETEL LAQLGSAELT ARKVVETLYP
ELVRSSGPEV DMQRPVVGLS DDQQFRRAKC CQPVPGERIV GITYRGQGVV IHAIDCPALE
EFEEQPSRWI DLHWHAGRHA PVHTVTLDLT ISNDAGVLGR ICTLIGEQKA NISDLRFTDR
KPDFYRLLVD VDLCDVEHLH TLMTALEAET DVAQISRHRD LSRKP
|
|---|
| |