| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1614 |
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| Symbol | |
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| ID | 3718567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 212309 |
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| End bp | 214426 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640069766 |
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| Product | TRAP dicarboxylate family transporter DctQ subunit |
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| Protein accession | YP_351660 |
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| Protein GI | 77462156 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAC CCTCTGCCGC CCCCGGGCCG GCCTCTTCCG CCGTTCATGC CCCCGATGTC
CACGAGGAAG TCACCGAGGG CCTGCCGCCC GGCTTCGGCC CCGGCATCAT GGGCAAGGTG
GCCTTCTGGA TCGCCGTCGC CTTCTCGCTC TTCCAGCTCT GGACCGCGGG CTACGGCACC
CTGCCGAGCC AGGTCGTGCG GGCGATGCAT GTGGGCTTCC TGCTGCTTCT CGGCTTCGGC
CTCGTGGGCA ACCTCCTCGC CAGGACCGCG GTCACGCGGG CAATCTTCTG GGGGCTCGGG
CTGATCGGCT TCGGCACCGG GATCTACAAC TGGGTGCTCT ACGAGGAGCT GATCCGGCGC
ACGGGCTTTC TCACCCATGC CGATCTCGTG GTGGGCACCG TGCTCGTGGT GCTGGTGTTC
GAGGCCAGCC GCCGGCTGAT GGGATGGCCG CTCGCCATCA TCGCGGGCCT CTTCCTCGCC
TACTGCTTTC TCGGCCAGCA CATGCCGCCG CCCTTCATCC ACCGCGGCTA CGATTTCGAG
CAGATCGTCG AGCATTTCGC CTTCGGCACC GAGGGGATCT ACGGCACGCC GATCTATGTG
AGCTCGGCCT ATATCTTCAT CTTCGTGGTC TTCGCGGCCT TCCTCGAACG GGCGGGGATG
CTGAACCTCT TCAACGATTT CGCGCTCGGC CTCGTGGGCG GCGTGCGCGG CGGGCCTGCA
CAGGTGGCGG TGCTTTCCTC GGCGCTGATG GGGACGATCT CGGGCTCGGG CGTGGCCAAT
GTGGTGGCCT CGGGCCAGTT CACCATCCCG ATGATGAAGC GCTTCGGCTT CAAGCCCGCT
TTCGCGGGCG GGGTCGAGGC CACGGCCTCG ATGGGCGGGC AGATCATGCC GCCGGTGATG
GGGGCCGTGG CCTTCATCAT GGCCGAGACG CTGAACGTGC CCTATGCCGC CGTCGTGCAG
GCCGCGATCC TGCCGGCCGT GCTCTATTTC GGCGTGGTGT TCTGGATGGT CTGGCTTCAG
GCCGGGCGCG ACGGTCTGCG CGGCCTGCCG CGGTCGGAGC TGCCGAACCC GTGGCATGCG
GTGCGCGACC AGTGGCCGCT GATCCTGCCT CTGGCGGCGC TCGTCTATCT GCTCTTCGCG
GGCTACACGC CGATCTTCGC CGGCACGATG GGCCTCGCGC TGGTGGCCGT GCTGATCCTC
GGCACGCCGC TTGCTGCCAT GATCGGGCCC ATGGCCTTCC GGCTCGTCTT CTGGGTTGCG
CTGGGTCTCG CCTCCGCCGC CTTCCTGAAG CTCGGCGTCA ACTTCCTCGT GCTGGTGATC
GGCCTTCTCG TGCTGGCCTG CGCCCTCTTC AAGGGCGCGC GCCCGACCAT CGGCATCCTC
CGCGATGCTC TGGCGCAGGG TGCGCGCAAC GCGCTGCCGG TGGGCATCGC CTGCGCCATC
GTGGGCATCG TCATCGGTAC GCTGACGCTG ACGGGCATCG CCTCGACCTT CATCGGCGCG
ATCATCGCCA TCGGGCGGGA CAACCTGTTC CTGTCGCTGG TCCTCACCAT GATCACCTGC
CTCGTCCTCG GCATGGGGAT CCCGACCATC CCGAACTATA TCATCACCTC CTCGCTCGCG
GGGCCGGCGC TTCTCGATCT CGGCGTGCCG CTTCTCGTGA GCCACATGTT CGTCTTCTAC
TTCGGCATCA TGGCGGACCT CACCCCGCCG GTGGCGCTGG CCTGTTTCGC GGCCGGTCCC
ATCGCCAAGG CGCCGGGGCT GAAGATCTCG CTGCAGGCGG TGCGTCTGGC GGCCGCGGGC
TTCGTGATCC CCTTCATGGC GGTCTACACG CCGTCGCTCA TGCTGCAGGA CGGAGGCGCC
ATCGCCGAGA CCTGGGGCTA CCCGGTCGAG GTGGTCTATA TCTTCCTCAA GGCGGTGCTG
GCCATCGGCC TATGGGGCGT GGCGGTCGTG GGGCAGCTCT TCGGGCGGGC GACGATGCTC
GAGCGGGCGC TTGCGCTGGC GGCCGGCGTG TCGCTGGTCC TTGCCCTTCC GGCGACGGAC
GAGGTGGGCT TCGCCCTCGC GGTGGCGACG CTGCTCCTGC ACTGGCTGCG CGTGCGGCGC
GCGGCGCGGG CCGCATGA
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| Protein sequence | MSAPSAAPGP ASSAVHAPDV HEEVTEGLPP GFGPGIMGKV AFWIAVAFSL FQLWTAGYGT
LPSQVVRAMH VGFLLLLGFG LVGNLLARTA VTRAIFWGLG LIGFGTGIYN WVLYEELIRR
TGFLTHADLV VGTVLVVLVF EASRRLMGWP LAIIAGLFLA YCFLGQHMPP PFIHRGYDFE
QIVEHFAFGT EGIYGTPIYV SSAYIFIFVV FAAFLERAGM LNLFNDFALG LVGGVRGGPA
QVAVLSSALM GTISGSGVAN VVASGQFTIP MMKRFGFKPA FAGGVEATAS MGGQIMPPVM
GAVAFIMAET LNVPYAAVVQ AAILPAVLYF GVVFWMVWLQ AGRDGLRGLP RSELPNPWHA
VRDQWPLILP LAALVYLLFA GYTPIFAGTM GLALVAVLIL GTPLAAMIGP MAFRLVFWVA
LGLASAAFLK LGVNFLVLVI GLLVLACALF KGARPTIGIL RDALAQGARN ALPVGIACAI
VGIVIGTLTL TGIASTFIGA IIAIGRDNLF LSLVLTMITC LVLGMGIPTI PNYIITSSLA
GPALLDLGVP LLVSHMFVFY FGIMADLTPP VALACFAAGP IAKAPGLKIS LQAVRLAAAG
FVIPFMAVYT PSLMLQDGGA IAETWGYPVE VVYIFLKAVL AIGLWGVAVV GQLFGRATML
ERALALAAGV SLVLALPATD EVGFALAVAT LLLHWLRVRR AARAA
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