| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1605 |
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| Symbol | |
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| ID | 3718558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 201425 |
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| End bp | 202399 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640069757 |
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| Product | TRAP dicarboxylate family transporter DctP subunit |
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| Protein accession | YP_351651 |
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| Protein GI | 77462147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0380662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA AATCCCTTGC CCTCGCCGCG CTGCTCGGCG CCGCCGCCGT CCTGCCGGCC
GCCGCTCAGG ACGTGGTGGT GCGCGTCGCC TACGAGAACA ACCCGGGCGA ACCCACCGAC
CTCGTGATGA ACCGCTGGGC CGAGCTCGTG AAGGAAGCCT CGGACGGCAA CGTGGCCCTC
GAGCTCTATC CCTCGTCGCA GCTCGGCGCG AAGCAGGATG TGATCGAGCA GGGCCTGCTC
GGCGTCAACG TCATCACCAT CGCCGACGTG GGCTTCCTGA CCGACTACGA CCCGGACCTC
GGCATCCTCT TCGCCCCCTA CCTGACCGAC AGCCCCGAGC AGCTCTTCAA GATCTACGAG
AGCGACTGGT TCAAGGAGAA GGAAGCCGCG CTGCGCGAGA AGGGCGTGCA TATCGTCATC
TCGAACTACC TCTACGGCAC CCGTCAGCTT CTGGCCAAGA AGAAGGTCGA GAAGCCCGAG
GATCTGGCCG GCATGAAAAT CCGCGTGCCC AACAACATCA TGCAGATCAA GGCGTTCGAG
CTGATGGGCG CCACGCCCAC CCCGATGCCG CTGGGGGATG TCTACCCGGC GCTGACCCAG
GGCGTGATCG ACGGTGTCGA GAACCCGCTG CCCGTCCTCT ACGGCGGCAA GTTCCAAGAG
CAGGCGAAGG AGCTGTCGAT GATCGGCTAC CTGACCAACA CCTCGCTCTG GCTCGGCGGC
GAGGCCTATT TCTCGACCCT CGATCCCGAA GTGGTGACCA TGCTGCACGA GACCGGCTAT
CAGGCGGGCC TCTACAGCCA GGAGCTCGCG GCGCAGGAAG AGGCCAAGAT GCTCGAGGCC
ATGAAGGAAG CGGGCGTCAC CGTGACCGAG CCCGACGTCG AGGCCTTCCG CGAGAAGACC
AAGGCCTTCT ACACCATGTT CCCGGAGTGG TCCGAGGGAC TTTACGAGCA GATCCAGGCG
GCTCTCGCCG AGTGA
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| Protein sequence | MKLKSLALAA LLGAAAVLPA AAQDVVVRVA YENNPGEPTD LVMNRWAELV KEASDGNVAL
ELYPSSQLGA KQDVIEQGLL GVNVITIADV GFLTDYDPDL GILFAPYLTD SPEQLFKIYE
SDWFKEKEAA LREKGVHIVI SNYLYGTRQL LAKKKVEKPE DLAGMKIRVP NNIMQIKAFE
LMGATPTPMP LGDVYPALTQ GVIDGVENPL PVLYGGKFQE QAKELSMIGY LTNTSLWLGG
EAYFSTLDPE VVTMLHETGY QAGLYSQELA AQEEAKMLEA MKEAGVTVTE PDVEAFREKT
KAFYTMFPEW SEGLYEQIQA ALAE
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