| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1596 |
|---|
| Symbol | deoB |
|---|
| ID | 3718586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 191024 |
|---|
| End bp | 192220 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640069747 |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_351641 |
|---|
| Protein GI | 77462137 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1015] Phosphopentomutase |
|---|
| TIGRFAM ID | [TIGR01696] phosphopentomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGG CGTTTCTCAT CGTGATGGAT TCGGTGGGAT GCGGCGGTGC GCCGGATGCG
GCGGCCTTTG GTGACGCGGG CTCGAACACC CTCGGCCATA TCGCCGAGGC TTGCGCAGCG
GGCCGCGCCG AGGAGGGGCG GAGCGGCCCG CTGCGGCTGC CGGTCCTCGA CGCGCTGGGT
CTCGGGCGCG CCATCGAGCT GGCCTCGGGC CTCACCGCGC CGGGGCTCGG GGCAGAGCCC
TCGGGCCGCT GGGGCGCCGC GACCGAGGTC TCGAAGGGCA AGGACACGCC CTCGGGCCAC
TGGGAGCTGG CGGGCGTGCC GGTGCCGTGG GACTGGCACT ATTTCCCCGA CCGCTGCCCT
GCCTTCCCGG ACGATCTCAC GGCCGAGATC TGCCGGCGGG CGGGCACCGA AGGCATCCTC
GGCAACCGGC ATGCCTCGGG CACGGCGGTG ATCGAGGAAC TGGGCGCCGA GCATGTGCGC
ACCGGCTGGC CGATCTGCTA CACCTCGGCC GACAGCGTGC TTCAGATCGC GGCCCATGAG
GAGGCCTTCG GGCTCGACCG GCTGCTGGCA CTCTGCGCGG GGCTGGCGCC GACGCTGCAT
GCGATGCGCG TGGGCCGGGT GATCGCGCGC CCCTTCACGG GCGCACCCGG CAGCTTCGCC
CGCACGCCCA ACCGGCGCGA CTATGCCATC GCGCCGCCCG CGCCGACGCT CCTCGACATA
GCGGCCGCGG CGGGGCGGGC CACTCATGCC ATCGGCAAGA TCGGCGACAT CTTCTCGCAT
CGCGGGATCG GGCAGCTGCA CAAGGGCCGC GACGATGCCG CGCTCTTCGA CCGGCTGGAC
GCTTTGGCCG ACACGGCCGA GGAGGGCGCG CTCACCTTCG CGAACTTCGT CGAGTTCGAC
TCGCTCTACG GCCACCGCCG CGACGTGTCG GGCTATGCGC GGGCGCTCGA ATGGTTCGAC
GGGCGGGCGG GAGCGTTTCT CGCGCGGCTC CGGCCGGGCG ACATGGCGCT GTTCACCGCC
GACCATGGCA ACGATCCCAC CTTCCGCGGC ACCGAGCACA CGCGCGAACG GGTGCCGGTG
CTGATCGCGG GCACCGGGGA AGGGCCGCTC GGCCTCTGCG CCTATGCCGA TGTGGCGGCG
ACCGTGGCCG CGCATCTGGG CCTCTCCAAC CCCGGGCCGG GGAGGGCGCT CGCATGA
|
|---|
| Protein sequence | MPRAFLIVMD SVGCGGAPDA AAFGDAGSNT LGHIAEACAA GRAEEGRSGP LRLPVLDALG
LGRAIELASG LTAPGLGAEP SGRWGAATEV SKGKDTPSGH WELAGVPVPW DWHYFPDRCP
AFPDDLTAEI CRRAGTEGIL GNRHASGTAV IEELGAEHVR TGWPICYTSA DSVLQIAAHE
EAFGLDRLLA LCAGLAPTLH AMRVGRVIAR PFTGAPGSFA RTPNRRDYAI APPAPTLLDI
AAAAGRATHA IGKIGDIFSH RGIGQLHKGR DDAALFDRLD ALADTAEEGA LTFANFVEFD
SLYGHRRDVS GYARALEWFD GRAGAFLARL RPGDMALFTA DHGNDPTFRG TEHTRERVPV
LIAGTGEGPL GLCAYADVAA TVAAHLGLSN PGPGRALA
|
|---|
| |