| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1565 |
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| Symbol | appA |
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| ID | 3718631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 155130 |
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| End bp | 156482 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640069714 |
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| Product | AppA, antirepressor of ppsR, sensor of blue light |
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| Protein accession | YP_351608 |
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| Protein GI | 77462104 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.935845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACG ACCTCGAGGC GGACGTCACG ATGACGGGCT CGGATCTGGT TTCCTGCTGC
TACCGCAGCC TGGCGGCCCC GGATCTGACG CTGCGCGACC TCCTCGACAT CGTCGAGACC
TCGCAGGCGC ACAATGCCCG GGCGCAGCTG ACCGGCGCGC TCTTCTACAG CCAGGGCGTC
TTCTTCCAGT GGCTCGAAGG CCGCCCCGCC GCCGTGGCGG AGGTCATGAC CCACATCCAG
CGGGACCGGC GCCACAGCAA CGTCGAGATC CTCGCAGAGG AACCGATCGC CAAGCGCCGC
TTTGCGGGAT GGCACATGCA GCTCTCCTGC TCGGAGGCCG ACATGCGCAG CCTCGGGCTG
GCCGAGAGCC GGCAGATCGT GACCGTGGGC CGCAGCCTGG TGGCCGACAA CACCAACATC
TTCTCTTTCG ATAGGATCGC CGCCGTGCGC CGTTTCCTCT CCGACGTCTG CGCAGCGCGG
ACTCTCGCCC CCGATACCCC CGTCGAGGCG GACACCTTCG CCCTTTATGC CCTGACCGAG
GCGCAGGCGG GCCGCTCCGG CCGTGCCAAG GCCGTGGCGC GGCTCTCCGA TCTGCTGAGC
ACCGATCCGC TCGGTCGCCT GACCGAGGTC GAGGAGCTGC TGCGCGCCCA TGCGCCGACC
GCCGCCGATT TCGCGCGGCT GTTCGAGGCC TGCGCCGAGC GCCTGACGCG CGCGCTGGCC
GAGGATCGCA TCTCGCGGAT GCAGGTGACG CTGGCCTATT CGGCCCTGCA GATGGCGCTG
CGCCGGATCC ATCACCTGCC CGACCCGCAG AAGAGCGTGG GCGCCGTGCT GGTCGCCGGC
GTGCCGGGTC ACAAGCCGAT CCTCGAGGCG GCCCTCGCGG CCGAGATGCT GCGCGCCGTG
GGCTGGTCGA CCTCGGTCGT GCATCCCGAG AGCGTCGCGG CCCTGGCCGC GCGGCTGAAG
ACCTCGCGCA CCTCGACGCT GGTCGTGGCG CCGAGCCTTC TGGAGGGAAC CGAGCAGGAG
GCCGACACGC TGCGGTTCGT CTCCGCGCTC AGGGCGCGGA CCGATCTTCC CGGCCTGAGC
ATCCTGGTCG GGGGCCGGCT GGCGCAACTT CCCCCCTCGA AGCTGAAGGA CTCCGGCGCC
GATGCCGGGT TCGCACATCT TGCGCTGCTT CCGGCCGCCC TCGCCCGTGT GGCCTGCCCG
GCCAATGCCG ACTGCTGCTC GATGCGCGCC TGCCGGATGC CCGCGTCCCA ATGCTGCGAC
AAGCGCATCA ACCCCGAATT CCTGCTGGCG AACGTCATGC CGAGCGTGCT GACCCGCATC
TCCTCGCGCC AGGACCGCCG CCGCAGCGCC TGA
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| Protein sequence | MQHDLEADVT MTGSDLVSCC YRSLAAPDLT LRDLLDIVET SQAHNARAQL TGALFYSQGV
FFQWLEGRPA AVAEVMTHIQ RDRRHSNVEI LAEEPIAKRR FAGWHMQLSC SEADMRSLGL
AESRQIVTVG RSLVADNTNI FSFDRIAAVR RFLSDVCAAR TLAPDTPVEA DTFALYALTE
AQAGRSGRAK AVARLSDLLS TDPLGRLTEV EELLRAHAPT AADFARLFEA CAERLTRALA
EDRISRMQVT LAYSALQMAL RRIHHLPDPQ KSVGAVLVAG VPGHKPILEA ALAAEMLRAV
GWSTSVVHPE SVAALAARLK TSRTSTLVVA PSLLEGTEQE ADTLRFVSAL RARTDLPGLS
ILVGGRLAQL PPSKLKDSGA DAGFAHLALL PAALARVACP ANADCCSMRA CRMPASQCCD
KRINPEFLLA NVMPSVLTRI SSRQDRRRSA
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