Gene RSP_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1562 
Symbol 
ID3718628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp152005 
End bp152691 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID640069711 
Productfumarylacetoacetate hydrolase family protein 
Protein accessionYP_351605 
Protein GI77462101 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC ATGTCTTTGC CCCGCCCGCC GCGCCCTCCC TGCCCGTTGC GGAGAGCCAG 
ACGCTCTTCC CGGTGCGGCG CGTCTACTGC ATCGGCCGGA ACTATGCCGC CCATGCGGTC
GAGATGGGCG GCGATCCCGA CCGCGAGCCG CCGTTCTTCT TCCAGAAGAA CCCCGACAAT
CTCGACCCGT CGGGCCGCTT CCCCTACCCG CCCGAAAGCT TGGACGTCCA TCACGAGGTC
GAGCTCGCGG TGATGCTGGG CTCGGGCGGG ACGGACATTC CGGTCGAGGA GGCGATGGCC
CATGTGTGGG GCTATGCGCT CGCCCTCGAC ATGACCCGGC GCGACCTGCA GGGCGAGGCG
AAGAAGGCCG GCCGGCCGTG GGAGGTGGGC AAAGCCTTCG AACGGTCCGC CCCGGTGGGT
CCGGTGCATC CCGCAGCGCG GATCGGCCAT CCCGAAGCGG GGCGGATCGA GCTCCGTGTC
AATGGCGCGC TGCGGCAGGA GGGCGATCTC AACCAGATGA TCTGGAAGGT GCCGGAAATG
ATCTCCGTCC TGTCGCGCCA TTTCGCGCTG GCCGCGGGCG ACGTGATCCT GACGGGCACG
CCTTCCGGGG TCGGCGCGGT GCAGCGCGGA GACGTGATGG AGGCCAGCAT CGACGGTCTC
GGCTCGCTGC GCGTCGAGGT GGTCTGA
 
Protein sequence
MSDHVFAPPA APSLPVAESQ TLFPVRRVYC IGRNYAAHAV EMGGDPDREP PFFFQKNPDN 
LDPSGRFPYP PESLDVHHEV ELAVMLGSGG TDIPVEEAMA HVWGYALALD MTRRDLQGEA
KKAGRPWEVG KAFERSAPVG PVHPAARIGH PEAGRIELRV NGALRQEGDL NQMIWKVPEM
ISVLSRHFAL AAGDVILTGT PSGVGAVQRG DVMEASIDGL GSLRVEVV