Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1559 |
Symbol | icd |
ID | 3718625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 147831 |
End bp | 149045 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640069708 |
Product | isocitrate dehydrogenase |
Protein accession | YP_351602 |
Protein GI | 77462098 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.421856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAGA TCAAGGTAGC GAACCCCGTC GTCGAGCTCG ACGGCGACGA GATGACCCGC ATCATCTGGG ACTTCATCAA GCAGAAGCTG ATCCTGCCCT ACCTCGACAT CGACCTGCAT TACTACGACC TCGGCATCGA GGAGCGCGAC CGCACCGAGG ACCGGATCAC GGTCGATGCG GCCCATGCGA TCAAGCAGTA TGGCGTGGGC GTGAAATGCG CCACCATCAC GCCGGACGAG GCGCGGGTCG ACGAATTCGG CCTGAAATCC ATGTGGAAGA GCCCGAACGG CACGATCCGC AACATCCTCG GCGGCGTGAT CTTCCGCCAG CCGATCATCT GCCGCAACGT CCCGCGCCTC GTGCCGGGCT GGACGAAGCC CATCGTCGTC GGCCGCCATG CCTTCGGCGA CCAGTATCGC GCGACGGACT TCCGCTTCCC GGGCAAGGGC AAGCTCACGC TGAAATTCGT GGGCGAGGAC GGCGCGGTGA TCGAGCGCGA GGTGTTCGAC GCGCCGGGCT CGGGCGTGAC CATGGCGATG TACAACCTCG ACCAGTCGAT CATCGACTTC GCGCGGGCCT CGATGAACTA CGGGCTGAAC CTCGGCTGGC CGGTGTACCT CTCGACCAAG AACACGATCC TCAAGGCCTA CGACGGGCGC TTCAAGGACC TCTTCCAGCA GGTCTACGAG GAGGAATTCG CCGAGAAGTT CAAGGCGGCG GGCATCACCT ACGAGCACCG GCTGATCGAC GACATGGTGG CCTCGGCGCT GAAATGGTCG GGCGGCTATG TCTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCGGA TACGGTGGCG CAGGGCTTCG GCTCGCTCGG GCTGATGACG AGCGTGCTGA TGACGCCGGA CGGGCAGACG GTGGAGGCCG AGGCCGCGCA TGGCACGGTC ACGCGGCACT TCCGCCAGCA TCAGGCGGGC AAGGAGACCT CGACCAACTC GATCGCCTCG ATCTACGCCT GGACGGGGGG CCTCAAGCAC CGCGCCAAGC TCGACGGCAA TGCCGATCTC GCCCGCTTCG CCGAGACGCT CGAGCGGGTC ACGGTGCAGA CGGTCGAGGA CGGCTTCATG ACGAAGGACC TCGCACTCCT CGTGGGCCCG GATCAGAAGT GGCTGACCAC GATGGGCTAT CTCGAGAGGG TCGACGAATA TCTCGACCGC GCGCTCGGCG CCTGA
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Protein sequence | MSKIKVANPV VELDGDEMTR IIWDFIKQKL ILPYLDIDLH YYDLGIEERD RTEDRITVDA AHAIKQYGVG VKCATITPDE ARVDEFGLKS MWKSPNGTIR NILGGVIFRQ PIICRNVPRL VPGWTKPIVV GRHAFGDQYR ATDFRFPGKG KLTLKFVGED GAVIEREVFD APGSGVTMAM YNLDQSIIDF ARASMNYGLN LGWPVYLSTK NTILKAYDGR FKDLFQQVYE EEFAEKFKAA GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMTPDGQT VEAEAAHGTV TRHFRQHQAG KETSTNSIAS IYAWTGGLKH RAKLDGNADL ARFAETLERV TVQTVEDGFM TKDLALLVGP DQKWLTTMGY LERVDEYLDR ALGA
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