Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1555 |
Symbol | |
ID | 3718622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 145829 |
End bp | 146182 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640069705 |
Product | transthyretin-like protein |
Protein accession | YP_351599 |
Protein GI | 77462095 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.552439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGAC TGACGACGCA TGTGCTCGAC ACCGCGCAGG GCCGGCCGGC CGCCGGGGTG CGGATCGTGC TCTGCCGGCT CGAGGGCGGC AACCGCAGCG AGATCGGCAC GGCGGTCACG AATGACGACG GCCGCACGGA CCGGCCGCTG CTCGACGGCG CGGCGCTGGT GCCGGGCACC TACGAGCTCA CCTTCGGGGC CGGCGCCTAC CTGCGCGCGG GCGGGCTCGG GGCTGCGGCG CCGCTCTTTC TGGACGAGAT CCCGATCCGC TTCGGCATCG CGGATGCGGC GGGGCACTAT CATGTGCCCC TTCTCCTGTC GCCCTACGGC TATTCCACCT ACCGCGGAAG CTGA
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Protein sequence | MGRLTTHVLD TAQGRPAAGV RIVLCRLEGG NRSEIGTAVT NDDGRTDRPL LDGAALVPGT YELTFGAGAY LRAGGLGAAA PLFLDEIPIR FGIADAAGHY HVPLLLSPYG YSTYRGS
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