| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1554 |
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| Symbol | |
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| ID | 3718621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 144267 |
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| End bp | 145682 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640069704 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_351598 |
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| Protein GI | 77462094 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03164] OHCU decarboxylase
[TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.442375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT ATCCCCGAGA CATGCGCGGC CACGGGCCCA CTCCGCCCGA TGCGGCCTGG
CCCGGCGGAG CCCGGATCGC CGTCTCGATC GTGCTGAACT ACGAGGAGGG CGGCGAGAAC
TGCCTCCTGC ATGGAGATGC GCAGTCGGAG GCCTTCCTGT CCGACATCGC CGGCGCCCAG
CCCTGGCCGG GTCAGCGGCA CTGGAACATG GAATCGATCT ACGATTACGG TGCCCGCGCG
GGCTTCTGGC GGCTGCACCG GCTCTTCACC GGGCTGAACA TCCCGGTGAC GGTCTATGGC
GTGGCCACCG CGCTGGCCCG CTCGCCCGAG CAGGTGGCGG CGATGAAATC CGCCGGGTGG
GAGATCGCCT CGCACGGGCT GAAATGGGTC GAGCATCGCG ACATGCCCGA GGAGGAGGAG
CGCCGCCAGA TCGCCGAGGC GATCCGGCTG CATGCCGAGG TGGTGGGCGA GCGACCGCGC
GGCTGGTATA CGGGGCGCTG CTCGGTCAAT ACGGTGCGGC TCACCGCCGA AGAGGGCGGC
TTCGACTGGA TCTCGGACAC CTATGACGAC GACCAGCCCT ACTGGCTCGA GACCGGCACA
CGCGACCAGC TGGTGATCCC CTACACGCTC GAGGCCAATG ACATGCGCTT CGCCACGGCG
CCGGGCTACA TCGAGGGCGA GCAGTTCTTC ACCTATCTGC GCGACAGTTT CGACACGCTC
TATGCCGAAG GCTGTGCTGG GCAGGCGAAG ATGTTCTCGA TCGGGCTCCA TTGCCGGCTG
ATCGGGCGGC CCGGCAAGAT CGCGGGGCTG AAGCGCTTTC TGGACTATGC CCGCACCCAT
GAGCGGGTCT GGTTCCCGTG CCGGGGCGAC ATCGCCCGCC ACTGGCACGA GACCCATCCC
CATCGTCGCC GCCCGCGGCC CTCGCGCATG GATCGCGAGA GCTTCGTGGC CCATTTCGGC
GGGATCTACG AACATTCGCC CTGGATCGCC GAGCGCGCCT TCGAGCTGGA ACTAGGCCCC
GCCCATGACA GCCCTGCGGG CCTCGCCAAT GCGCTCGCCC GCATCTTCCG CAGCGCCACG
CCCGCGGAGC GGCTGAGCGT GCTCAAGGCC CACCCCGATC TCGCCGGCAA GCTCGCGCAG
GCGCGGCGGC TGACGGCCTC CTCCTCCTTC GAACAGTCGA GCGCCGGGCT CGATGCGCTC
ACCGACGCCG AGCGGGCCGA GTTCGCCACC CTCAACGCCG ACTATGTGGC CAAGCACGGC
TTCCCCTTCA TCATCGCCGT GCGCGACCAC GACAAGGCCG GCATCCTCGC CGCCTTCGAG
ACCCGGCTCG CCCACGACAG CGCCACCGAA TTCGCCACCG CCTGCCGTCA GGTGGAACGT
ATCGCCGAAC TCCGGCTTCA GGACATGCTG AAATGA
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| Protein sequence | MKRYPRDMRG HGPTPPDAAW PGGARIAVSI VLNYEEGGEN CLLHGDAQSE AFLSDIAGAQ
PWPGQRHWNM ESIYDYGARA GFWRLHRLFT GLNIPVTVYG VATALARSPE QVAAMKSAGW
EIASHGLKWV EHRDMPEEEE RRQIAEAIRL HAEVVGERPR GWYTGRCSVN TVRLTAEEGG
FDWISDTYDD DQPYWLETGT RDQLVIPYTL EANDMRFATA PGYIEGEQFF TYLRDSFDTL
YAEGCAGQAK MFSIGLHCRL IGRPGKIAGL KRFLDYARTH ERVWFPCRGD IARHWHETHP
HRRRPRPSRM DRESFVAHFG GIYEHSPWIA ERAFELELGP AHDSPAGLAN ALARIFRSAT
PAERLSVLKA HPDLAGKLAQ ARRLTASSSF EQSSAGLDAL TDAERAEFAT LNADYVAKHG
FPFIIAVRDH DKAGILAAFE TRLAHDSATE FATACRQVER IAELRLQDML K
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