Gene RSP_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1542 
Symbol 
ID3718666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand- 
Start bp133187 
End bp133867 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID640069691 
ProductABC transporter, ATPase subunit 
Protein accessionYP_351585 
Protein GI77462081 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGTGA AGGATCCTTC GGACAAGCTG CTCTCGCTCG AGGGCGTGAC CAAAAGCTAC 
GCGACCGGCG AGGGGCCGGT GCAGGTTCTG GCCGGGGTGG ACCTGACGCT CGCCGCGGGC 
GAGAGCCTCG CGCTGACGGG AGAGTCGGGC AGCGGCAAGA GCACGCTCCT GCATCTGGCG 
GCCGGGCTCG ATGCGGCGGA CGCGGGCCGG ATCGTCGTGG CGGGCCATGA TATCTCGCAG 
GCCGGCGATG CCGAGCGCGC GCGTCTGCGG CGGGGCACGG TCGGGCTCGT CTTCCAGCAG 
TTCAACCTGA TCCCCTCGCT CGACGTGGCG GCCAATCTTG CCTTTCAGTC CCGCCTCGCC 
GGTCGGCACG ATCCCCAATG GCAGGCCGAG CTGGCCGAGA CGCTGGGGCT TGCCGCCTGC 
CTGCACCGCT ATCCCGAGCA GCTCTCGGGC GGCCAGCAGC AGCGGGTGGC CATCGGCCGG 
ACGCTTGCCG CCCGCCCCCG CCTCGTGCTG GCCGACGAGC CCACCGGCAA CCTCGACGAG 
GCCACGGGCG ATGCCGTCAT GGCGCTTTTC CTGCGCCTCG TGAGCCAGAC GGGCGCCGGG 
CTTCTGATGG TCACCCATTC GGCCCGCCTC GCGGGGCGGC TTCAGGGCCG GGTGCAGCTC 
TCGGCGGGGC GGGTCGCATG A
 
Protein sequence
MRVKDPSDKL LSLEGVTKSY ATGEGPVQVL AGVDLTLAAG ESLALTGESG SGKSTLLHLA 
AGLDAADAGR IVVAGHDISQ AGDAERARLR RGTVGLVFQQ FNLIPSLDVA ANLAFQSRLA 
GRHDPQWQAE LAETLGLAAC LHRYPEQLSG GQQQRVAIGR TLAARPRLVL ADEPTGNLDE 
ATGDAVMALF LRLVSQTGAG LLMVTHSARL AGRLQGRVQL SAGRVA