| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1541 |
|---|
| Symbol | |
|---|
| ID | 3718665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 130803 |
|---|
| End bp | 133190 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640069690 |
|---|
| Product | ABC transporter inner membrane protein |
|---|
| Protein accession | YP_351584 |
|---|
| Protein GI | 77462080 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CGCTGGCGGC GCTGCTCTCG CACTGGCGGC GGAGCCCGCT GCAGCTTGCG
ATGCTGCTTC TGGGGCTCGC GCTCGCCACG GCGCTCTGGT CGGGGGTGCA GGCGATCAAT
GCCGAGGCAC GGGCGAGCTA TGCCCAAGCC GCGGCGACGC TCGGGCAGGA TCGGCTGAGC
CGGATCGCGG CCGAGGGGCC TGTGCCGCAG GAGACCTACG TCGCCCTGCG CCGGGCAGGC
TGGCGCGTCT CGCCGGTGGT CGAAGGGCGG CTGCGCATCG ACGAGCGGCG GAGCCTGCGC
CTGATCGGGA TCGACCCGCT GACCCTGCCC GCCCCGGCCC GGCAGGTCGA GTTCGGCGAG
GGCGACGCGC TGCTGCCCTT CCTGACCGCG CCGGGGCTGA TCTTCGCCGA CCCCGAGACG
CTGGCGCGGA TGCAGGGCGC GGAGCTGCCG CCGATGCGCG CGGCCGAAGG GCTGCCCCCC
GGCACCGGGC TCATGGATAT CGGGCAGGCG CAGAGGCTTC TGGGCATGGA GGGGCGGATC
TCGCATCTCC TCCTCGATCC CGCGGCGCCG CAGCCGGGGC CCCTGCCCGA TGGGCTACGC
CTCATCCCGC CCGACAGCGA GAGCGACGTG GCGCGGCTCA CCGACAGTTT TCACCTGAAC
CTCACCGCCT TCGGGCTTCT CTCCTTTGCC GTGGGCCTCT TCATAGTCCA TTCCGCCATC
GGGCTCGCCT TCGAGCAGCG CCGCCCGATG TTTCGAACCC TCCGCGCGCT TGGCGTCACG
GCACGGACGT TGATCGGACT TCTCTTCGCG GAACTCCTGC TCTTCGCGCT ACTCGCGGGC
GCGGCCGGCC TCCTGCTCGG CTATCTGGTG GCGGCGCTGC TGCTGCCCGA TGTGGCGGCG
ACCCTGCGCG GCCTCTACGG CGCCGAGGTG CCGGGCACGC TCGCCTTCCG CCCGGGATGG
GCCGCGGCCG GGCTCGGGAT CGCGCTTCTG GGCACCCTCG TCTCCTCGGC CCAGAGCCTC
TGGCGCGTGG CCCATCTGCC GCTACTGGCC CCCGCCCAGC CCCGCGCCTG GGCCGTGGCC
TCCGAGCGGG CGCTCTGGCG GCAGGCGATG GCGGCGGTGG GCCTCCTGAT CCTCGCGGGC
GTCCTCCTGC TCTGGGGCCG GGGGATCGTC GCGGCCTTCG TGCTGCTCGC GGCGCTGCTT
CTGGGCGCAG CGCTCCTGTT GCCCGTGCTG CTCGCGGCCC TCCTGCGGGG GGCGCAGGGG
CTCGCACGCG GGCCCATCGC GCAGTGGTTC TGGGCCGACA CGCGCCAGCA GCTGCCCGGC
CTCTCGCTCG CGCTGATGGC GCTCCTCCTT GCGCTTGCGG CCAATATCGG CGTTGGCACC
ATGGTCTCGA GCTTCCGGCT GACCTTCACC GGATGGCTCG ACCAGCGCCT CGCCTTCGAG
CTCTATCTCA GCGCCCCCGA TCGGGACACC GCGGACCGGG TCGTGCGCTG GCTCGAGCCG
CGGGCCGAGG CGGTGCTGCC CATCGTGCGG GCCGAGACCG AGGTGCTGGG CCAGCCCGCG
CAGCTTTACG GCATGGCGGA CCATCCGACC TACCGCGAGA ACTGGCCGCT GCTGGCCGAG
GTGCCGGGCG TGTGGGACCT GCTCGCGGGC GGCGACTGGG CGCTCGTCAA CGAACAGCTC
GCCCGCCGCG AGGGGCTGGA GCCGGGCGAT CCGATCCGCC TGCCGGGCTG GCAGGGGCGG
ATCGCGGCCG TCTACAGCGA TTACGGCAAC CCTTCGGCGC AGGTGATCCT GGGCCTCGAC
CGTTTCTTCG CGCTGCACCC CGAGGCCGAG CGGCGGCGCT ACGGCATCCG CGTGGCCCCC
GACCGCGCGG CCGCGCTGGC CGAGGAGATG CGCACGGCCT TCGATCTGGG CGACGAGGGG
CTGATCGATC AGGCGAGCCT CAAGGGCTTC TCGCTGCAGG TGTTCGAGCG CACCTTCGCC
GTGACGGCCG CGCTCAATGT GCTGACGCTG GGGGTGGCGG GGCTTGCCAT GTTCGCAAGC
CTCATGGTCC TGTCGGGGAT GCGGCTGCCG CAGCTGGCCC CCGTCTGGGC CATGGGGCTG
ACCAAGGCGC GGCTCGCGCG GCTCGAGATG CTCCGCACGC TCCTTCTGGC GGCAGGCACG
ATGGCCGCGG CCCTGCCGCT CGGGCTGGCC CTCGCCTGGG TGCTGCTGGC GGTGGTCAAT
GTGCAGGCCT TCGGCTGGCG CCTGCCCATG CATGTCTTCC CGCTCGACTG GCTCACGCTC
GGCACGCTGG CCCTCGTGGC CGCGGCGCTC GCCGCCGCCG TGCCGGTGCG GCGCCTGGCC
CGGCTGCGGC CGGCCGACCT CCTGAGGGTC TTTGCCAATG AACGCTGA
|
|---|
| Protein sequence | MSTALAALLS HWRRSPLQLA MLLLGLALAT ALWSGVQAIN AEARASYAQA AATLGQDRLS
RIAAEGPVPQ ETYVALRRAG WRVSPVVEGR LRIDERRSLR LIGIDPLTLP APARQVEFGE
GDALLPFLTA PGLIFADPET LARMQGAELP PMRAAEGLPP GTGLMDIGQA QRLLGMEGRI
SHLLLDPAAP QPGPLPDGLR LIPPDSESDV ARLTDSFHLN LTAFGLLSFA VGLFIVHSAI
GLAFEQRRPM FRTLRALGVT ARTLIGLLFA ELLLFALLAG AAGLLLGYLV AALLLPDVAA
TLRGLYGAEV PGTLAFRPGW AAAGLGIALL GTLVSSAQSL WRVAHLPLLA PAQPRAWAVA
SERALWRQAM AAVGLLILAG VLLLWGRGIV AAFVLLAALL LGAALLLPVL LAALLRGAQG
LARGPIAQWF WADTRQQLPG LSLALMALLL ALAANIGVGT MVSSFRLTFT GWLDQRLAFE
LYLSAPDRDT ADRVVRWLEP RAEAVLPIVR AETEVLGQPA QLYGMADHPT YRENWPLLAE
VPGVWDLLAG GDWALVNEQL ARREGLEPGD PIRLPGWQGR IAAVYSDYGN PSAQVILGLD
RFFALHPEAE RRRYGIRVAP DRAAALAEEM RTAFDLGDEG LIDQASLKGF SLQVFERTFA
VTAALNVLTL GVAGLAMFAS LMVLSGMRLP QLAPVWAMGL TKARLARLEM LRTLLLAAGT
MAAALPLGLA LAWVLLAVVN VQAFGWRLPM HVFPLDWLTL GTLALVAAAL AAAVPVRRLA
RLRPADLLRV FANER
|
|---|
| |