| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1527 |
|---|
| Symbol | |
|---|
| ID | 3718690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 114434 |
|---|
| End bp | 117754 |
|---|
| Gene Length | 3321 bp |
|---|
| Protein Length | 1106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640069676 |
|---|
| Product | UvrD/Rep family helicase |
|---|
| Protein accession | YP_351570 |
|---|
| Protein GI | 77462066 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.529663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC TGAGAGACGA GGCCTCCGAG CGTCAGGTGC AGGCCGCCGA TCCGCGCGCC
TCGACCTGGC TCTCGGCCAA TGCGGGCTCG GGCAAGACGC GGGTGCTGAC CGACCGGGTG
GCGCGGCTGC TGCTCGACGG GGTCGAGCCG CAGCGCATCC TCTGCCTGAC CTATACCAAG
GCCGCCGCCT CCGAGATGCA GAACCGGCTG TTCCGGCGGC TGGGCGAATG GGCGATGCTC
GACGATGCCG AGCTGCGCCG TGCGCTGGAT GCTCTGGGCG TGGCCGCCGT AGGGCACGAG
GTGCTGGCGC AGGCCCGCAG GCTATTCGCT CGCGCCATCG AGACGCCGGG CGGGCTGCGG
ATCCAGACGA TCCACTCCTT CTGCGCGACG CTCCTGCGCC GCTTCCCGCT GGAGGCCGGG
GTCTCGCCGC AGTTCACCGA GCTCGACGAC CGCGCCGCAC GCCTCCTGCG TGAGGAGATC
GTCGAGGAGT TGGCCGACCG CATCGCCCCC GAGGTGGTGG CCGATCTGGC GCGGGCCTAT
ACCGGCGAGG ATTTCGGCGC GCTGGCCGAG GAGGTGGCGC GCAATGCCGC GGGCCTTCTG
CCGCCGCTCG ACGCTCCCGC CTGCCGGGCG CTCTACGGGG TGGAGGGCGA CGAGGCGGCG
CTTCTGGCGC AGGTCTTCCT CGGTGGCGAG GAAGAGTGGA TGCCCGCGCT GATCGCGGCG
CTTGAGGCGG GATCGGCGAA CGACCAGAAG GCTGCGGCGA AGCTGCGGCT TCTGTCCTTC
GCGTCGCCGA CGACCGCCAC GCTGGCCGGG CTCGAGGGGG TGCTCCTGAC CGGGGCCTCG
GCGAAGGAGC CCTATACCGC CAAGCTCGGC AGCTTCCCGA CCAAGGCCAC ACGCGGGGCG
CTCGGCCCGC TCGCCGACCG GCTCGATGCG CTGATGCGCC GGGTCGAGGC CGCGCGCCCG
GTGCGCTGCT GCCTGCTCGC CGCCGAGCGG GCGCGATTGA TCCATGCTTT CGCGGGCGTG
TTCCTGCCGC TCTATCAGGC GCGCAAGGCC GCCCGCGGCT GGCTCGATTT CGACGATCTG
ATCCAGCGCG CCAAGGGCCT GCTGACCGAT CCGTCGGTGG CGCAGTGGGT GCTCTTCCGG
CTCGACGGCG GGATCGACCA TATCCTCGTC GACGAAGCGC AGGACACGAG CCCCGACCAG
TGGAAGGTGA TCGAGCTTCT GGCGCAGGAA TTCACTTCGG GGCGCGGCGC GCGCGAGGTG
GAACGGACGA TCTTTGTCGT GGGCGACAAG AAACAGTCGA TCTACTCCTT CCAGGGCGCC
GATGTGGCGG CCTTCGACCG GATGCGGGCC GAGTTCGGCG AGCGTCTCGC GGGCGCCCGG
CGGCGGCTCG AGGAGCTGGA TCTGCTGCAT TCCTTCCGCT CCTCGCCCGC GATCCTGCGG
CTGGTGGATC TCACCTTCGA CGAGCCCCGC CGGCAGGCGC TGGGCGGCGA GGTCCGCCAC
ATCGCCTTCC GCGGCGACAT GCCGGGGCGG GCCGAGCTCT GGCCGCTGGT CGAGGCCGCC
GAGGAGCCCG AGCCCGAGAA CTGGTTCGAT CCGGTGGACC TCGTCTCGGA TGAGCATCAT
GCGGCGCGGC TCGCGCGGCA GGTGGCCACC CGCATCCGCG CCATGATCGA GGCAGGGGTG
CAGATCCCGC ATCCCGGCGG CTTCCGCCCC GTGGCGGCGG GCGATTTCCT GATCCTCGTC
CAGCGCCGCT CGGACATCTT CGGCGAGATC ATCCGGGCTT GCAAGGAAGC CCGCCTGCCC
ATCGCCGGGG CCGACCGGCT GAAGCTCGGG GCCGAGCTTG CGGTGCGCGA CCTGTCGGCG
CTGCTCGCCT TCCTCGCCAC GCCCGAGGAC GATCTGTCGC TCGCCGCCGT CCTGCGCTCG
CCGCTCTTCG GCTGGAGCGA GGGCGAGCTC TTCGATCTGG CGCACGGGCG CGAGGGGTAT
CTCTGGCGCA GGCTCTACGA CCGCGAGGCG GCCCATCCCG GGACGGTGGC GATCCTGCGC
GACCTGCGCG ATCAGGCGGA TTTCCTGCGC CCCTTCGACC TGATCGAGCG CGCGCTGACC
CGCCACGACG GCCGCCGCCG GCTGCTCGCC CGGCTGGGCG AGGAGGCCGA GGACGGGATC
GACGAGCTGC TCAGTCAGGC GCTGGCCTAC GAGCGGACCG ACGTGCCGAG CCTCACGGGC
TTCCTGACAT GGCTTCAGAC CGACGAGGTC GAGGTGAAGC GGCAGATGGA GGCCGCGGGC
GGGCGCATCC GGGTGATGAC GGTGCATGGC TCGAAAGGGC TCGAGGCGCC CATCGTGATC
CTGCCCGACA CGGCCGACCG CAAGCCGCGC GAGCGCGACG AGCTGTTCAC GCTGGAGGGG
GGCGCGCGGG TCTGGAAGAC GCCCGCCGCC GAGAGCCCGC CGCAGATTGC CGCCGCCCGC
GAGGCGCGGC GCGCACGCGA TGCGGCCGAG AACCTGCGGC TGCTCTATGT CGCCATGACG
CGGGCCCAGT GCTGGCTGAT CGCGGCTGCG GCCGGCAAGC TCGAGACGGG GGGCGCCTGG
CACGACCTGA TCCGGCAGGG GATGGAGGCT GCGGGGGCCG AGCGGCGCGA CGACGGGGCG
CTGGTGCTCG ACGAAGGCCT CTGGCCCCCG GCCGCGCCGC AGGCCTCGGC AGCGGCCGCC
GCCGCGCGAC CCGTCCTGCC CGGCTGGGCG TGGGCGCCCG CGACCGAGCC CCCGGCCGCG
CCCGAGGTGC TGTCGCCCTC GGCCCTCGGC GGGGCCAAGG CGCTGCCCGG CGATGCGATG
CCCACCGAGG AGGCCCTGGC GCATGGCTCG GCCGTCCACC GGCTGCTCGA GCATCTGCCG
CTCCATCCGC CCGAGGGGTG GGAGGCGGCG GCGCGGGGGC TCCTGCCCGA TCTTCCCGAT
GTGGCCCCCG TTCTGGCGGA GGCCCGGGCG GTGCTCTCGG CCGAACATCT GGCCGAGGCG
CTGGTGCCGC ATGCGCTGCT CGAGGTGGCG GTGACGGCCG AGGTGGCGGG GCGGCGGCTT
TCCGGCACCA TCGACCGGCT GGTGGTGGAG CCCGACCGGG TGCTGGCGGT CGATTACAAG
ACGAACCGTG TGGTCCCGGA CCGTCCCGAA GAGGTGCCCG AGGGCATCCT GCGGCAGATG
GGCGCCTATG CCGAGGCGCT GGCGCAGATC TACCCCGGAC GGACGATCGA GACGGCGATC
CTCTGGACGC AGGCGGCCCG CCTGATGCGG CTGCCGCGCG ATATCGTGAG GTCGGCCCTG
GTCCGGGCCA CGACAACTTG A
|
|---|
| Protein sequence | MSGLRDEASE RQVQAADPRA STWLSANAGS GKTRVLTDRV ARLLLDGVEP QRILCLTYTK
AAASEMQNRL FRRLGEWAML DDAELRRALD ALGVAAVGHE VLAQARRLFA RAIETPGGLR
IQTIHSFCAT LLRRFPLEAG VSPQFTELDD RAARLLREEI VEELADRIAP EVVADLARAY
TGEDFGALAE EVARNAAGLL PPLDAPACRA LYGVEGDEAA LLAQVFLGGE EEWMPALIAA
LEAGSANDQK AAAKLRLLSF ASPTTATLAG LEGVLLTGAS AKEPYTAKLG SFPTKATRGA
LGPLADRLDA LMRRVEAARP VRCCLLAAER ARLIHAFAGV FLPLYQARKA ARGWLDFDDL
IQRAKGLLTD PSVAQWVLFR LDGGIDHILV DEAQDTSPDQ WKVIELLAQE FTSGRGAREV
ERTIFVVGDK KQSIYSFQGA DVAAFDRMRA EFGERLAGAR RRLEELDLLH SFRSSPAILR
LVDLTFDEPR RQALGGEVRH IAFRGDMPGR AELWPLVEAA EEPEPENWFD PVDLVSDEHH
AARLARQVAT RIRAMIEAGV QIPHPGGFRP VAAGDFLILV QRRSDIFGEI IRACKEARLP
IAGADRLKLG AELAVRDLSA LLAFLATPED DLSLAAVLRS PLFGWSEGEL FDLAHGREGY
LWRRLYDREA AHPGTVAILR DLRDQADFLR PFDLIERALT RHDGRRRLLA RLGEEAEDGI
DELLSQALAY ERTDVPSLTG FLTWLQTDEV EVKRQMEAAG GRIRVMTVHG SKGLEAPIVI
LPDTADRKPR ERDELFTLEG GARVWKTPAA ESPPQIAAAR EARRARDAAE NLRLLYVAMT
RAQCWLIAAA AGKLETGGAW HDLIRQGMEA AGAERRDDGA LVLDEGLWPP AAPQASAAAA
AARPVLPGWA WAPATEPPAA PEVLSPSALG GAKALPGDAM PTEEALAHGS AVHRLLEHLP
LHPPEGWEAA ARGLLPDLPD VAPVLAEARA VLSAEHLAEA LVPHALLEVA VTAEVAGRRL
SGTIDRLVVE PDRVLAVDYK TNRVVPDRPE EVPEGILRQM GAYAEALAQI YPGRTIETAI
LWTQAARLMR LPRDIVRSAL VRATTT
|
|---|
| |