Gene RSP_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1478 
Symbol 
ID3718714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp63409 
End bp65028 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content70% 
IMG OID640069626 
ProductABC oligopeptide transporter, fused ATPase subunits 
Protein accessionYP_351521 
Protein GI77462017 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0559812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCCG TTCTCGATGT GAAGGGCCTC CGGGTCGCCT TCCAGACCAA TGACGGCGAG 
GTTCAGGCCG TGCGCGGGAT CGACCTCTCG GTGATGCCCG GCGAAACCGT GGCCATCGTG
GGCGAATCCG GCTCGGGCAA GAGCCAGACC ACCATGGCGC TGATGGGGCT TCTGGCGCAG
AACGGCCGGG CCACCGGCTC GGCCCTCTAC CGCGGGCGCG AGCTTATCGG CCTGTCCGAG
CGCGAGCTGA ACAAGGTGCG CGGCGACAAG ATCACCATGA TCTTCCAGGA GCCGATGACC
TCGCTCGACC CGCTCTACCG GATCGGCGAC CAGCTGGCCG AGCCGCTGCG CTTCCACCGC
GGGCTCTCGA AGCGCGAGGC GCGGCCCCGG ATCGTCGAGC TTTTGCGCCT CGTGGGCATC
CCCGAGCCCG AGCGGCGGAT CGACAGCTAT CCGCACGAAC TGTCGGGCGG GCAGCGCCAG
CGGGTGATGA TCGCCATGGC GCTCGCCTGC GATCCCGACA TCCTGATCGC CGACGAGCCC
ACCACCGCGC TCGACGTGAC GATTCAGGCG CAGATCCTGA CCCTGCTCGC CGATCTGCAG
AAGCGGCTCG GCATGGCGAT CCTCTTCATC ACCCATGACC TCGGCATCGT GCAGCGCTTC
GCCGACCGGG TCTATGTGAT GCAGGCGGGC GAGGTGGTCG AGACCGGCGA GACCGCGGCG
CTGTTCGAGG CGCCGTCGCA TCCCTACACG CGGATGCTGC TCGATGCCGA GCCCGAGGGG
ACGAAGGCGC CGCCGCCCGA GACGGCGCCG GTGCTGATGG AGGGCCGCAA CGTCGAGGTG
GTCTTCTCGA GCGGCGGCGG CCTCTTCGAG GCGCCGAACG AGCTGCGCGC CGTGGACGGC
GTGTCGGTCC GGCTGCGGCA GGGCCAGACC ATCGGGGTGG TGGGCGAATC CGGGTCGGGC
AAGTCCACCC TCGGGCGCGC GCTCCTGCGG CTCCTGCCCT CGGCGGGCCT TGTGACCTTC
GAGGGGCGCG AGCTCGCCCG CGATGCGGCC GAGATGCGCC CGCTGCGACG CCGGATGCAG
CTCGTCTTCC AGGATCCGTT CGGCTCGCTC TCGCCGCGGA TGACCGTGGG GCGGATCATC
ACCGAAGGCC TCAAGATCCA CGAGCCGGAC CTTTCCACCC GCGAGCGCGA CCGCCGCGCG
GGCGCGGCGC TGGCCGAGGT GGGCCTCAGC CCCGCGATGC GCAACCGCTA CCCGCACGAG
TTTTCAGGCG GCCAGCGCCA GCGCATCGCC ATCGCTCGGT CGATGATCCT GAAGCCCAGG
GTGATTGTTC TGGACGAGCC GACCTCGGCC CTCGACCGGT CGGTGCAGAA GCAGATCGTG
GACCTGCTGC GCGACCTGCA GGCGCGGCAC GGGCTCTCCT ACCTCTTCAT CAGCCACGAC
CTCGCCGTAG TCCGGGCGCT GGCCGACTAT ATCCTCGTGA TGAAGGAGGG CCGCATCGTC
GAGGAGGGCC AGACCGCCGA CATCTTCGAC CGTCCGCAGG AGGCCTACAC CCGGACGCTC
ATGGCCGCCG CGCTCGAGAC GCGGCGCTTT CGCGAGGAGG CGGAACGGAC GAGCGTCTGA
 
Protein sequence
MEPVLDVKGL RVAFQTNDGE VQAVRGIDLS VMPGETVAIV GESGSGKSQT TMALMGLLAQ 
NGRATGSALY RGRELIGLSE RELNKVRGDK ITMIFQEPMT SLDPLYRIGD QLAEPLRFHR
GLSKREARPR IVELLRLVGI PEPERRIDSY PHELSGGQRQ RVMIAMALAC DPDILIADEP
TTALDVTIQA QILTLLADLQ KRLGMAILFI THDLGIVQRF ADRVYVMQAG EVVETGETAA
LFEAPSHPYT RMLLDAEPEG TKAPPPETAP VLMEGRNVEV VFSSGGGLFE APNELRAVDG
VSVRLRQGQT IGVVGESGSG KSTLGRALLR LLPSAGLVTF EGRELARDAA EMRPLRRRMQ
LVFQDPFGSL SPRMTVGRII TEGLKIHEPD LSTRERDRRA GAALAEVGLS PAMRNRYPHE
FSGGQRQRIA IARSMILKPR VIVLDEPTSA LDRSVQKQIV DLLRDLQARH GLSYLFISHD
LAVVRALADY ILVMKEGRIV EEGQTADIFD RPQEAYTRTL MAAALETRRF REEAERTSV