| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1461 |
|---|
| Symbol | kdtA |
|---|
| ID | 3718756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 46812 |
|---|
| End bp | 47999 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640069609 |
|---|
| Product | putative 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_351504 |
|---|
| Protein GI | 77462000 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.393685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG CCTTCGGCCT CTCGCTCGGG ACTGCCTTGC GGCGTGACCC CGCCGAGGGG
CCGGTGCGGC CTCAGCGCCC GCTCGGGCGG CTGATCTGGC TGCATGCGCC GACGCGCGAC
TCGGCCCGGC CCATGGCCGA GCTGGGCCGG CGGATCATCC TCGACGAGGG CTTTCCGGTA
CTGCTCACCA CCCATGTCCC TGTGAGTTCG GGCGGCATCC TCATCGTGCA GCCGCCCCCG
CCCGACACGC CAGCCGCCGT CGCGGCCTTC CTCGACCACT GGCGGCCCGA TGCGGCCTTC
ATGGCCGAGG GCGAGCTTCG GCCGAGCCTC ATCAACTCGG CCTTCGACCG GAACGTGCCG
CTCGCGCTGG TCGATGGTGC GGCCCCGCGC ATCCTGCCCG GCCGCGAGAG CTGGTGGCCG
GGGCAGATGC GCAACCTCCT TGCCAAGTTC CGCCACATCT TCACCCTCGA CGAGGCCGCC
GCCCGCGCCT TCCGCAAGGC CGGAAGCTCC TCGCACGTCA CGCAGGTGGC GGGCCGGCTC
GAGGAGGGCA GCCTCGCGCT GCCCTGCACC GAGGCCGAGC GCGCCGCGTT GGCGCGGCTT
CTCGCCCCCC GGCAGGTGTG GCTCGCCGCG GGCCTTCCCA TCGAGGAAGA GGCCGCCGCC
ATCGCCGCGC ATCACGCGGC GCTCAAGCTC GCGCACCGGA TGCTGCTGAT CGTCGTGCCG
CAGGAGCCCG ACCGCGCCGC CGCTTTCGCC GCGCGCTGCG AGGCCGAGGG CTGGAAGGTC
GCCCGCCGCG CCGCCGACGA GGAGCCGGAC GCCGACACCG AGGTCTTCGT GGCCGACGGC
ATGGCGGAGC TCGGCCTCTG GTATCGGCTG GCGCCGGTGA CATGGCTCGG CGGCAGCCTC
AGCGTGGGCT GCGTGCTGGA CCCGCTCGAG GCGGCCTCGC TCGGTTCGGC CCTGATCCAC
GGCCCCCATT TCGGCCCGCA TGGCGCGACG CTGGCCCGGC TCTCGGCGGC GCGCGCCTCC
CTTCCCGTGG CCTCGGCCCG CGGCCTCGCA GAGGCGCTGG CGGATCTGCT CGCCCCGGAT
CGGGTGGCGC GGCTGGCCCA TGCCGGCTGG GCCGTGGCCT CGGAAGGAAC CGAGGTCACC
GACCGGATGG TGGCGCTCGC CGGACGCCTC GTCGAGCGGG AGGCCTGA
|
|---|
| Protein sequence | MANAFGLSLG TALRRDPAEG PVRPQRPLGR LIWLHAPTRD SARPMAELGR RIILDEGFPV
LLTTHVPVSS GGILIVQPPP PDTPAAVAAF LDHWRPDAAF MAEGELRPSL INSAFDRNVP
LALVDGAAPR ILPGRESWWP GQMRNLLAKF RHIFTLDEAA ARAFRKAGSS SHVTQVAGRL
EEGSLALPCT EAERAALARL LAPRQVWLAA GLPIEEEAAA IAAHHAALKL AHRMLLIVVP
QEPDRAAAFA ARCEAEGWKV ARRAADEEPD ADTEVFVADG MAELGLWYRL APVTWLGGSL
SVGCVLDPLE AASLGSALIH GPHFGPHGAT LARLSAARAS LPVASARGLA EALADLLAPD
RVARLAHAGW AVASEGTEVT DRMVALAGRL VEREA
|
|---|
| |