Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1372 |
Symbol | |
ID | 3720818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 3150624 |
End bp | 3151862 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640072599 |
Product | major facilitator transporter |
Protein accession | YP_354453 |
Protein GI | 77464949 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAT CTCCGATCTT CACGCCCGTC CTGATCTCGG GCTGCATCGT CCTGATGCTG GGCTTTGCGA TCCGCGCCAG CTTCGGCGTG TTCCAGATCC CCATCGCCGA GGAGTTCGAC TGGCCGCGGT CCGACTTCTC GATGGCCATC GCCATCCAGA ACCTCGCCTG GGGCATCGGC CAGCCGATCT TCGGGATGCT GGCCGAGAAG TTCGGCGACC GCCGGGCCAT CGTCGCGGGC GCGCTGACCT ATGCGGCGGG TCTCGTGCTC TCGAGCTTCG CCGTGACGCC GCTCCAGCAT CAGTTCCTCG AGGTGCTGGT GGGGTTCGGG ATCGCGGGCA CGGGCTTCGG CGTGATCCTT GCGGTGGTGG GACGGGCCAC GGCGCCGGAG CATCGCTCGC TGGCGCTCGG CATCGCCACG GCTGCGGGGT CGGCGGGGCA GGTCTTCGGG GCGCCCGCGG CCGAGATCCT GCTGGGCTTC TACAGCTGGC AGACAGTGTT CGTGATCTTC GCGGGCGTCA TCCTTGCCGC GCTCTTTGCG CTGCCCTTCA TGCGTGCGCC GGTCACCGCG ACGAAGGCCG AGCTCGAGGA GTCGCTCGGC ACGGTGCTCA GACGGGCCTT CCGCGATCCG TCCTATACGC TGATCTTCGT GGGCTTCTTC TCCTGCGGCT ATCAGCTGGC CTTCATCACC GCGCACTTCC CCGCCTTCGT GACGGAGATG TGCGGGGCGA TCGATCCGCG CGGCCCGCTG GCGGCGCTGG GGATCACCAC CACCTCGGCG CTGGGCGCAC TGGCGATCTC GCTGATCGGG CTGGCCAACA TCGTGGGCAC GATCACCGCA GGCTGGCTCG GCAAGCGCTA CTCGAAGAAA TATCTGCTGG CCGCGATCTA CACCGGGCGC ACGCTGGCGG CCGCGCTCTT CATCCTCGTG CCGATGACGC CCACCACGGT CCTTCTCTTC TCCCTCAGCA TGGGCGCGCT CTGGCTCGCG ACCGTGCCGC TCACGAGCGG GCTCGTGGCC CATCTCTACG GTCTGCGCTA CATGGGCACG CTCTACGGGT TCGTCTTCCT CAGCCACCAG CTCGGCAGCT TCATGGGTGT CTGGCTGGGC GGGCGGATGT ATGACATGAC CGGCGACTAT ACGATGGTCT GGTGGATCGG CGTGGGTGTC GGCGCCTTCT CAGCCATCGT TCACCTGCCC ATCCGCGAGA CCCGCAGCCC CGCGCTGCAG CCGGCCTGA
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Protein sequence | MTKSPIFTPV LISGCIVLML GFAIRASFGV FQIPIAEEFD WPRSDFSMAI AIQNLAWGIG QPIFGMLAEK FGDRRAIVAG ALTYAAGLVL SSFAVTPLQH QFLEVLVGFG IAGTGFGVIL AVVGRATAPE HRSLALGIAT AAGSAGQVFG APAAEILLGF YSWQTVFVIF AGVILAALFA LPFMRAPVTA TKAELEESLG TVLRRAFRDP SYTLIFVGFF SCGYQLAFIT AHFPAFVTEM CGAIDPRGPL AALGITTTSA LGALAISLIG LANIVGTITA GWLGKRYSKK YLLAAIYTGR TLAAALFILV PMTPTTVLLF SLSMGALWLA TVPLTSGLVA HLYGLRYMGT LYGFVFLSHQ LGSFMGVWLG GRMYDMTGDY TMVWWIGVGV GAFSAIVHLP IRETRSPALQ PA
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