| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1370 |
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| Symbol | |
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| ID | 3720817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 3148553 |
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| End bp | 3150163 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640072598 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_354452 |
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| Protein GI | 77464948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACT GGTGGCGCGG GTCGGTGACC TATCAGATCT ATCCCCGCTC GTTTCAGGAT
TCCGACGGCG ACGGCGTGGG CGACCTGCGC GGCATCATCG AGCGGCTCGA CCATGTGGCC
TGGCTCGGGG CCGATGCGAT CTGGCTCTCG CCGATCTTTC CCTCGCCCAT GGAGGACATG
GGCTACGACG TGTCGGACTA CACCGCCATC CACCCGCTCT TCGGCTCGAT GGAGGATTTC
GACGCGCTCC TCGCTCGCGC GCACGAGCTT GGGCTGAAGG TCATCATCGA CCAGGTGCTC
AGCCATTCCT CCTCGGCCCA TCCGTTCTTC CGCGAGAGCC GGCGGAGCCG CGACAATCCC
AAGGCCGACT GGTATGTCTG GGCCGACGCG CAGCCCGACG GCAGCCCGCC GAACAACTGG
CTGTCGGTCT TCGGCGGCTC GGCCTGGGAA TGGGATGCGC AGCGGCGGCA GTATTACCTG
CACAACTTCC TGATCTCGCA GCCCGACTTC AACTTCCACA ATCCCGAGGT GCAGGACTGG
CTGCTCGACC AGATGCGCTT CTGGCTTGAT CGGGGCGTGG ACGGCTTCCG TCTCGACACG
GTGAACTTCT ACTTCCATGA CGCCGAGCTC AGGTCGAACC GGCCGAACCC GCAGAACGGG
CCGATCCCGC CGGTCAATGC CTACGACATG CAGGACCATG CCTTCTCGAA GTCGCGGATC
GAGAATATCG CCTTCCTCCT CAGGATGCGG AAGCTGCTCG ACGACTACCC GGACAGGGCG
ATGGTCGGCG AGGTGGCCGA CGGGCTGCGC GGCCTTGCGA TCATGGCCGA ATATACCAGC
GGGACCGACC GGCTGCACAT GGCCTACACG TTCGAGATGC TCTCGCGCAC CTTCACCGCC
GGGCATTTCC GCAGCCGGAT CGAGGAGTTC TTCGCCACCG CACCGCAGGG CTGGCCCTGC
TGGGCCTTTT CCAACCACGA TGTGGTGCGC CATGCGACGC GCTGGGCCGG CCACGGGGCC
GAGGACGATG TGGCGCGGCT CGCGGCGGCC ATGCTCCTGT CCTTCGAGGG CTCGGTCAGT
CTCTATCAGG GCGAGGAGCT GGGCCAGACA GAGACCGAGC TGCTCTATGA GGAGCTGACC
GATCCGCCGG GCCTCCGGTT CTGGCCCGAG GAGAAAGGGC GCGACGGCTG CCGCACGCCG
ATGGTCTGGG ACGACGGGCC CGCGGGCGGC TTCACCACCG GCACGCCGTG GCTTCCGGTG
AAGCCGCCGC AGCTGGCGCG CAACGTGGCG TCGCAGAAGG GCATCCCCGG CTCGCTGCTG
GAGACCTACC GGGCGCTCCT GCAGTTCCGC CGGAGCCAGC CCGCGCTGAT CCGCGGCCGC
AGCCGGTTCT TCGACCTGCC GGAGCCGATG CTGGGCTTCA CCCGGACGCT CGACGGCCAG
TCGCTCGCCT GCTTCTTCAA CCTCGGCATC GAGCCGGTCT CGGCGACCCT GCCGGGCCAT
GGCGGGCTGA TCGGCCCGGC ACAGGCCGCC GTGCTCGAGG GCGACCGCCT TACCCTCGGG
GCGAACGGCT ATGCCTTCCT GCCCGCTCCG GAGGATGCCA GCGTCAGCTG A
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| Protein sequence | MSDWWRGSVT YQIYPRSFQD SDGDGVGDLR GIIERLDHVA WLGADAIWLS PIFPSPMEDM
GYDVSDYTAI HPLFGSMEDF DALLARAHEL GLKVIIDQVL SHSSSAHPFF RESRRSRDNP
KADWYVWADA QPDGSPPNNW LSVFGGSAWE WDAQRRQYYL HNFLISQPDF NFHNPEVQDW
LLDQMRFWLD RGVDGFRLDT VNFYFHDAEL RSNRPNPQNG PIPPVNAYDM QDHAFSKSRI
ENIAFLLRMR KLLDDYPDRA MVGEVADGLR GLAIMAEYTS GTDRLHMAYT FEMLSRTFTA
GHFRSRIEEF FATAPQGWPC WAFSNHDVVR HATRWAGHGA EDDVARLAAA MLLSFEGSVS
LYQGEELGQT ETELLYEELT DPPGLRFWPE EKGRDGCRTP MVWDDGPAGG FTTGTPWLPV
KPPQLARNVA SQKGIPGSLL ETYRALLQFR RSQPALIRGR SRFFDLPEPM LGFTRTLDGQ
SLACFFNLGI EPVSATLPGH GGLIGPAQAA VLEGDRLTLG ANGYAFLPAP EDASVS
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