Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1356 |
Symbol | |
ID | 3720802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 3128064 |
End bp | 3133490 |
Gene Length | 5427 bp |
Protein Length | 1808 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640072583 |
Product | hypothetical protein |
Protein accession | YP_354437 |
Protein GI | 77464933 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCC GTCACCTGCT GCCGGTCCTG ATGCTCGGTC TGATGCTGCC GCTCACCGCG GCCGCGCAGG ACTGGCTGCC CGACCGCCGC GTCGTCCTGA GCGCGGATAC CGACCTGCCG GGCAGCGACA TGGCGACCCT CCTCGACACG ACGCTCGACG GCTGCGAGCG CGCCTGCCTG TCGCGGACGG GCTGCACCGC CTTCACCTTC AACGGGCGCA ACGGCTCGTG CTTCCCGAAA TCCACTTCGG GCGATGCCGC ACCCTATCAG GGGGCGATCT CGGGCGTGGT GGTGCCGGAG GATCCCGCAC GGCAGGAGAC GGCCCGCGCC CGCGCCTCGG ATCTGGCCTT CCTGTCGGAC TATGATCTCA CGCGCGCGAA GGAGCAGGCG GCAGGGCTCG GCCACGAGCA TACGGTGAAC GGCTACACGG CCGAGGAGCA TCTCCAGAGC GCGGCCCGCG CCGAGGCGCA GGGCGACCGG ATTGCGGCGG CGAACTTCAC CGGCGCGGCG GTCAGCGCCT CGGACCGGGC CGAGAGCTGG ATCGACTATG CGCGCCGTCT GCGGGCGGCG GGCGAGGCGG ACAGCTCGTC CCGCGACACG TTGCGCGACC GCGCCTTCCG GGCGGCGATC AACGGCTATC TGCGCGCGGG CTCGCCCGCG CTGCGCCACA CGGCGCTGGT CGAACTCGCG CTTTCGGCCG AGACGATCGA CCGCGGGCGC GACATGGTGC AGGCGCTGCG CCTCGCCCAG TCGATCCAGC CGCGCGACGA CACGGCCCGG CTGCTCGACA CGGCGGCAGG GAAATACGGC TTCCGCATCA CCGAGAATGC GGTCGAGGCC GACCGGGTGC GGCCGCGGAT CTGCGTGACC TTCTCGGAGA AGCTGGCCGA CAGCGGCATC GATTACGCAA GCTATGTGCA GCTCGGAGAG CCGGGGCTGA CGGTCGAAGC CGAGGACCGG CGGATCTGCG TGGGCGGCGT GGCACACGGG GCGCGCCATG TGCTGACCTT CCGCGAGGGG CTGCCCGCGG CCGACGGCCA GACGCTCGCC AAGTCGGTGC AGATCGCGGC CTATGTCCGC GACCGCTCGC CCTCGGTGCG CTTCCCGAGC CGGGCCTATG TGCTGCCGCG CGCCGGCGCG CCGGCGATCC CGGTCGAGAC GGTGAACGCG AGGACGCTCG ATCTGGCGGT CTACCGGGTG TCTGACCGCA ACCTGTTGCG GGCGATCCAG CAGGATTACC TCGGCCGCCC GCTCGATCAG TGGCAGGCCG ACCAGTTCAC CTCCGAGGTG GGCGAAGAGA TCTGGACCGG CACCGGCGAG GTGGCGATGG AGGTCAACCG CGACATGACC ACCCGCCTGC CGATGGAGGA GCCGCTGCGG GGCCTGCCCG CGGGCATCTA TGCGCTGAAG GCCGCGATCC CGGGGCAGGA TGTCTACGAA CATCCGGCCG CCTGGCAGTG GTTCGTGATC TCCGACCTCG GCGTGACGAC GCTGTCGGGG ACGGACGGGC TGCATGTCTT CGTGCGGAGC CTCGGATCGG CCGAGCCCAA GGCCGGCGTC ACGGTCGAGC TTCTGTCGCG CGCGAATGCG GTGCTGGGCA CGGCCACGAC GGACGATCAG GGCCTCGCCG CCTTCGATGC GGGCCTCACG CGCGGCACCG GGGCGGCCGA GCCCGCTTTG GTGGTGGTGA AGGAGGGCGA GGCGGACATC GCGTTCCTGT CGCTCACCGA TCCGGAGTTC GACCTGTCCG ACCGGGGCGT GGAGGGGCAC GAACCCGCCC CGCCGGTGGA TGTGTTCCTT GCGACCGAGC GCGGCGCCTA TCGCGCGGGC GAGACGATCC ATGCCCTCGC GCTGGCCCGC GACGGCGAGG CCGCGGCCAT CGAGGGGCTG CCGCTGACCG CGATCCTGAA GCGGCCCGAC GGGGTGGAAT ATTCCCGCGC GCTGGCCTCG GGCACCGGGG CGGGCGGCCA TGTGTTCGAT CTGCCGCTCG CGGGCTCGGC GCCCCGGGGG GTCTGGCGGC TCGAGGTGCT GGCCGATCTC GAGGCGGCGC CGCTCGCCGC GAAGACCGTG CTGGTCGAGG ATTTCCTGCC CGAACGGATC GACGTGACGG CGAGCCTGCC CGAGGCGCCC ATCGCGCTCG GCGACTTGCC CGAACTGACG GTCGAGGCGA ACTTCCTCTA TGGCGCGCCG GGGGCGGATC TCGCCATCGA GGGCGAGGTG CTGCTGCGCG CGGCCGAGGG GCTGCCGAAG TTTCCGGGCT ATGTCTTCGG CCGCTCGACG GCGAGCTTCG ATCCGCAGGT CGCCTCGTTC GGCGGCCAGC GCACCGACGA GGCCGGTCAG GCGCGCTTCG CCCTCGATCT GCCGCAGGTC GAGGATCCGG CGCGCCCGCT CGAGATCCTC GTTGCGACCC GTGTCTCGGA AGGATCGGGG CGGCCCGTGG AGCGGACGAT CACCCGCCGC CTGCGCCCGG CCGAGCCGAT GATCGGCATC CGCCCGCTGT TCGACGGGGT GGCGGCGCAG GGCACCGACG CGCGCTTCGC GCTGGTGGGC GTGGGCCCCG AGGAGACGCC CGTGCCGATG TCTGTGCGCT GGACGCTGAA CCGGATCGAG ACCGACTATC AATGGTATCA GCAATGGGGC AACTGGGCCT GGGAGCCGGT CGAGACCCGG ACCCCGGTGG CCGAGGGCGA GGCGGAGCTC GGCACGTCTC CGGTCGAGAT CGGGGCGCCG GTGGACTGGG GCCAGTATGA ACTCGTGGTC GAGCGCAGCG ATGGGCGCCA GGCCGCCAGC TCGACGAGCT TCTACGCCGG CTGGTATGCG CCCGCCGACG TGACCGCCAC GCCCGACACG CTGGAGCTGT CGCTCGACAA GCCCGCTTAC CGGCCCGGCG AGACGGCACA GCTGCGCATC GTGCCGCGCG CACCCGGCAA GGCGCTGGTC ACCGTGCTCT CGAACCGGCT GATCGCGATG AAGGCGGTCG AGGTCGGCGA GGGCGAAACG CTGGTCGAGC TGCCGGTGAC GGACGAGTGG GGGACGGGCG TCTATGTGAC GGCCACGCTC CTGCGGCCGA TGGATGTGGC GGCAGGGCGC AACCCGACCC GGGCGCTGGG CCTCGCCCAT GCCGCCATCG ATCCGGGCGA GAAGAAGCTC GCGACCCGCA TCGAGACCGC GCCCGAGGCC GCGCCGCGTG GCCCGATGGA GGTCGCGGTG AAGGTCGAGG GCACGGCTCC GGGCGAGACG GCCTATGCCA CCCTCGCCGC GGTCGATGTG GGGATCCTGA ACCTCACCGG CTTCGAGACG CCCGACCCGG AGGACCATTA CTTCGGGCAG AGGAAACTCG GCGTCGGCAT CCGCGACCTC TACGGGCGGC TGATCGACGG GATGAACGGC GCGCAGGGCT CGGTGCGCTC GGGCGGCGAC GGCGGGCGGG CGCAGACGCA GGCCCCGCCT CCCACGGAAG AGCTGGTGGC CTTCTTCTCG GGCCCCGTCG AGGTGGGGCC CGACGGTCTC GCCCGCGCCA CCTTCGATCT GCCCGCCTTC AACGGCACGG TGCGGGTGAT GGCGGTCGTC TGGTCGAAGA CCGGCGTGGG ACATGCCGAG CAGGACGTGC TGGTGCGCGA TCCGGTCGTT GTGACGGCGA GCCTGCCGCG CTTCCTCGCG CCCGGCGACG AGAGCCGCCT GCTGCTCGAT ATCGCCCATG CGACCGGCCC CGCCGGCCGG GTGAGCCTCG ATGTCTCCTC GCCGGGCCTG ACGGTCGGAT CGGTGCCCTC GGGCCTCGAT CTGGCCGAGA AAGGCCGCGC CCGGATCGAG GTGCCGGTCT CGGCCGGCCG GACGGGCCTG CAGGAGATCG AGGTCTCGCT CACCACGCCG GACGGCAAGC AGCTGACCAA GCGGCTCGTC GTGCCGGTAG AGGTGAACGA CCCCGAGATC GCGCGGCGCG ACCGGCTGAC GCTGGAGGGC GGCCAGACCT TCACGCTGGA CGACAACCTG TTCGCGGGCT TCGTGCCCGG CACGGGGCGC GCAACCATGG CCATCGGCCC GATTGCGCGG CTCGATACGG CGGGGCTGCT GGCGAGCCTC GACCGCTATC CCTACGGCTG CACCGAGCAG ATCACGTCGC GGGCGCTGCC GCTCCTCTAT CTGAGCAGCG TGGCCCGGGC GCTCGACCTG CCCGGCACCG AGGACATGTC GGTGCGGATC GGGCAGGCCA TCGACGAGGT GCTGACCAAC CAGACCGCCG AGGGGGCCTT CGGCCTCTGG CAGGCGCAGT CGGGCGACTT CTGGCTCGAT GCCTATGTCA CCGACTTCCT GTCGCGGGCG AAGGCGCAGG GGCACAAGGT GCCGGAGCTG GCGCTGCGCC GGGCGCTCGA CAACCTCCGC AACCAGGTGA ACTACTCGGC CGACTTCGAC GAGGGCGGCG AGGCGCTGGC CTATGCGCTG ATGGTTCTCG CGCGCGAGGG GGCGGCCGCC ATCGGCGACC TGCGCTACTA TGCGGACGTC AAGGCGGATG CCTTCTCCAC CCCCGCGGCG CAGGCCCAGC TCGGGGCGGC GCTGGCCAGT TACGGCGATC AGCAGCGGGC GGATGCGATG TTCCGCAAGG CGGCCGCGCG GCTGAACGGG TCGCTCGTGG CCCAGTCGCA GCAGGTGTTC CGCGCCGACT ACGGCACCGC CTACCGCGAT GCGGCGACCG TGCTGACGCT CGCGGCCGAG GCAGGCTCGC AGGCGGTGGA CCGCGAGGCG GTGACGACCT CGCTCGCCGC GCGCACCGGC ACGCTCTCCA CACAGGAGGC GGTCTGGACG CTGCTGGCCA CGAACGCGCT GATCGACCGG CCGGAGCTCG AAGGGATCGC CATCGACGGC ACCCCCGCGA CCGGGCCGCT CGTCCGGCTG CTGCGCGACG GCGATCCGGC GGTGGCGGTC ACCAATTCGG GCGGGCCGCA GGTGCTGACC GTGACCACCA CCGGCGTGCC CTCCGAGCCC GAGTCCGCGG GCGGCAACGG CTATGCCATC GCGCGGAGCT ACTACACGAT GGAGGGCGAG GCCGCCGATC CGGGCTCGGT CGCTGCGGGC ACCCGGCTGG TCGCGGTGCT GGAGGTGACG CCCTTCGGCA ATGGCGAGGG GCGGCTCATG GTCAACGACC CGCTGCCCGC GGGCTTCGAG ATCGACAACC CGAACCTGAT GCGGGGCGGG CAGGTCGATG CGCTCGACTG GCTCTCCCCG GTCGAGAATG TGGCCCATGC CGAGTTCCGG CAGGACCGCT TCCTCGCCGC CCTCGACCGC TATGACGGCG AGGCCTTCCG GCTGGCCTAT ATCGTGCGCG CCGTCTCGCC GGGCACGTTC CACCATCCGG CGGCCTCGGT CGAGGACATG TATCGGCCCG AGTTCCGCGC CTGGACCGAG GCGGGCCGCG TCACCGTCAC CCCATGA
|
Protein sequence | MRIRHLLPVL MLGLMLPLTA AAQDWLPDRR VVLSADTDLP GSDMATLLDT TLDGCERACL SRTGCTAFTF NGRNGSCFPK STSGDAAPYQ GAISGVVVPE DPARQETARA RASDLAFLSD YDLTRAKEQA AGLGHEHTVN GYTAEEHLQS AARAEAQGDR IAAANFTGAA VSASDRAESW IDYARRLRAA GEADSSSRDT LRDRAFRAAI NGYLRAGSPA LRHTALVELA LSAETIDRGR DMVQALRLAQ SIQPRDDTAR LLDTAAGKYG FRITENAVEA DRVRPRICVT FSEKLADSGI DYASYVQLGE PGLTVEAEDR RICVGGVAHG ARHVLTFREG LPAADGQTLA KSVQIAAYVR DRSPSVRFPS RAYVLPRAGA PAIPVETVNA RTLDLAVYRV SDRNLLRAIQ QDYLGRPLDQ WQADQFTSEV GEEIWTGTGE VAMEVNRDMT TRLPMEEPLR GLPAGIYALK AAIPGQDVYE HPAAWQWFVI SDLGVTTLSG TDGLHVFVRS LGSAEPKAGV TVELLSRANA VLGTATTDDQ GLAAFDAGLT RGTGAAEPAL VVVKEGEADI AFLSLTDPEF DLSDRGVEGH EPAPPVDVFL ATERGAYRAG ETIHALALAR DGEAAAIEGL PLTAILKRPD GVEYSRALAS GTGAGGHVFD LPLAGSAPRG VWRLEVLADL EAAPLAAKTV LVEDFLPERI DVTASLPEAP IALGDLPELT VEANFLYGAP GADLAIEGEV LLRAAEGLPK FPGYVFGRST ASFDPQVASF GGQRTDEAGQ ARFALDLPQV EDPARPLEIL VATRVSEGSG RPVERTITRR LRPAEPMIGI RPLFDGVAAQ GTDARFALVG VGPEETPVPM SVRWTLNRIE TDYQWYQQWG NWAWEPVETR TPVAEGEAEL GTSPVEIGAP VDWGQYELVV ERSDGRQAAS STSFYAGWYA PADVTATPDT LELSLDKPAY RPGETAQLRI VPRAPGKALV TVLSNRLIAM KAVEVGEGET LVELPVTDEW GTGVYVTATL LRPMDVAAGR NPTRALGLAH AAIDPGEKKL ATRIETAPEA APRGPMEVAV KVEGTAPGET AYATLAAVDV GILNLTGFET PDPEDHYFGQ RKLGVGIRDL YGRLIDGMNG AQGSVRSGGD GGRAQTQAPP PTEELVAFFS GPVEVGPDGL ARATFDLPAF NGTVRVMAVV WSKTGVGHAE QDVLVRDPVV VTASLPRFLA PGDESRLLLD IAHATGPAGR VSLDVSSPGL TVGSVPSGLD LAEKGRARIE VPVSAGRTGL QEIEVSLTTP DGKQLTKRLV VPVEVNDPEI ARRDRLTLEG GQTFTLDDNL FAGFVPGTGR ATMAIGPIAR LDTAGLLASL DRYPYGCTEQ ITSRALPLLY LSSVARALDL PGTEDMSVRI GQAIDEVLTN QTAEGAFGLW QAQSGDFWLD AYVTDFLSRA KAQGHKVPEL ALRRALDNLR NQVNYSADFD EGGEALAYAL MVLAREGAAA IGDLRYYADV KADAFSTPAA QAQLGAALAS YGDQQRADAM FRKAAARLNG SLVAQSQQVF RADYGTAYRD AATVLTLAAE AGSQAVDREA VTTSLAARTG TLSTQEAVWT LLATNALIDR PELEGIAIDG TPATGPLVRL LRDGDPAVAV TNSGGPQVLT VTTTGVPSEP ESAGGNGYAI ARSYYTMEGE AADPGSVAAG TRLVAVLEVT PFGNGEGRLM VNDPLPAGFE IDNPNLMRGG QVDALDWLSP VENVAHAEFR QDRFLAALDR YDGEAFRLAY IVRAVSPGTF HHPAASVEDM YRPEFRAWTE AGRVTVTP
|
| |